Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_26180 |
Symbol | |
ID | 8634252 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | - |
Start bp | 2911837 |
End bp | 2913564 |
Gene Length | 1728 bp |
Protein Length | 575 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | ATPase component of various ABC-type transport systems with duplicated ATPase domain |
Protein accession | YP_003315356 |
Protein GI | 269795901 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.204743 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCACCT CTGCACCCGC TCCCGTGGAC GCCACCAGCA CGGCAGTCCT GTCCTTCACC GACCTCGACG TCAAGTTCGG CACCGAGTTC GGCACCGTGC ACGCCGTCAA GGGCATCTCC CTCGCGGTCC AGCCGGGCGA GGTCCTCGCG CTGGTCGGCG AGTCCGGCTC CGGAAAGTCC GTCACGTCGA TGACGGCCCT CGGTCTCCTG CCCAAGAACG CCCGGGTCTC CGGCCGGATC ACGGTCGGCG ACACGGTCGT GGGCGAGCTC GACGACCGCG GCCTGCGCCG CATGCGCGGC AACGACGTGG CCATGGTCTT CCAGGAGCCC ATGACCGCGC TCAACCCCGT GCTCACCATC GGGTCCCAGC TGACCGAGGC GCTCGAGCTG CACGGCATCG CCTTCGGCAA GAAGGCGCTG GCCCGGGCCG TCGAGCTGCT GCGGATGGTC GGCATCCCCG AGCCGGAGCG TCGCGTCAAG CAGTTCCCGC ACGAGCTCTC GGGTGGTCAG CGCCAGCGCG TGGTCATCGC CATGGCCATC AGCTGCGACC CCAAGGTGAT CATCGCCGAC GAGCCCACCA CGGCTCTCGA CGTGACCGTC CAGGCCGACA TCCTCGACCT GCTGCGCTCC CTCAAGGACA AGCTCAACAC CGGGATCCTG CTCATCACGC ACAACATGGG GGTCGTGGCC GACATGGCCG ACCGTGTGGC CGTGATGCTC AAGGGCTCGA TCGTGGAGAC AGGGACCGCC GACGCGGTCC TCAACCACCC GCAGCACGAG TACACCAAGA AGCTGCTCGG GTCCGTGCCC CGTCTCGGAT CGGGGCCGGG CCAGCTCGGG ACCTCGGTCA CCGAGGTCGG GGAAGCGCCC GAGGGCGACA AGCCGGCGCT CGAGCTGAAG AACCTGGTCA TCGAGTACCA GCGTCTGGGC AAGCCGCCGT TCCGGGCGGT CGACGACGTG ACCTTCACCG TCGGGTCGGG CGAGATCGTC GGTGTCGTGG GGGAGTCGGG CTCGGGCAAG TCGACCATCG CTCGCTGCGC GCTGGGTCTC ATCCCGGCGG TCGGCGGCTC GGTGTCGATC TTCGGGACCA GCTTTGCGGA GATGAACCGC AAGCAGTCCA AGGCGCTGCG CAAGCGCATC GGTGTGGTGT TCCAGGACCC CGCGTCGTCG CTCAACCCGC GGTTCCCCAT CGGTGACCTC ATCGCCGAGC CCCTCGTGGT GCACAAGATC GGCGACAAGA AGTCCCGGCT GGCCAAGGTC TACGAGCTGC TCGACGCCGT GGAGCTGCCG CGCGACGTCA TCAACCGCTA CCCGCACGAG CTCTCGGGCG GTCAGCGTCA GCGCGTGAGC ATCGCCCGCG CGCTCACGCT CGACCCGGAG CTGCTGGTCG CCGACGAGCC CACCTCGGCG CTCGACGTGT CGGTCCAGGC GAGCGTCCTG GCGATGTTCA CCGCGCTGCA GGAGCGCTAC CGCTTCGGCT GCGTCTTCGT CTCGCACGAC CTCGCGGTCA TCGACATGCT CGCGCACCGC GTCGTGGTGC TGCAGAACGG CAAGATCGTC GAGCAGGGCA CGCGTGAAGA GGTGCTGCTC AACCCGCGTG AGGAGTACAC GAGGCGTCTT CTCGCAGCGG CACCGGTCCC CGAGCCGGGG GAGCAGCGCC GTCGTCGCGA GGCGCGGCAC ACCCTGCTCA CCGAGCTGGG CGACGACATC ACCGAGCTCC ACACCTGA
|
Protein sequence | MSTSAPAPVD ATSTAVLSFT DLDVKFGTEF GTVHAVKGIS LAVQPGEVLA LVGESGSGKS VTSMTALGLL PKNARVSGRI TVGDTVVGEL DDRGLRRMRG NDVAMVFQEP MTALNPVLTI GSQLTEALEL HGIAFGKKAL ARAVELLRMV GIPEPERRVK QFPHELSGGQ RQRVVIAMAI SCDPKVIIAD EPTTALDVTV QADILDLLRS LKDKLNTGIL LITHNMGVVA DMADRVAVML KGSIVETGTA DAVLNHPQHE YTKKLLGSVP RLGSGPGQLG TSVTEVGEAP EGDKPALELK NLVIEYQRLG KPPFRAVDDV TFTVGSGEIV GVVGESGSGK STIARCALGL IPAVGGSVSI FGTSFAEMNR KQSKALRKRI GVVFQDPASS LNPRFPIGDL IAEPLVVHKI GDKKSRLAKV YELLDAVELP RDVINRYPHE LSGGQRQRVS IARALTLDPE LLVADEPTSA LDVSVQASVL AMFTALQERY RFGCVFVSHD LAVIDMLAHR VVVLQNGKIV EQGTREEVLL NPREEYTRRL LAAAPVPEPG EQRRRREARH TLLTELGDDI TELHT
|
| |