Gene Sked_26110 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_26110 
Symbol 
ID8634245 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp2898590 
End bp2899612 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content75% 
IMG OID 
ProductABC-type antimicrobial peptide transport system, ATPase component 
Protein accessionYP_003315349 
Protein GI269795894 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.157431 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.756128 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAGCC GGACCTCGAC CCCTCCCGCG GCGCGGCACG CGAGCGCCCC GGCGCTGGCA 
GCCGCGCCGG ACGCCCCGGA CATCCTCTGC CGCGACCTCG TGCGCATCTT CGTCACCGAG
GGCCTCGAGG TCCAGGCGCT CCAGGGCCTC AACCTCCGCG TCGACCCGGG GGAGATCGTC
GCGGTGGTCG GCGCGTCCGG CTCGGGGAAG TCGACGCTCC TGTCGATCCT GTCCGGCCTC
GACCGCCCCA CCGGCGGGTC CGCCGAGGTG GCGGGGGCCG ACCTGCTGGC CCTCGGTCGG
CGTGCACGGG TCGAGTACCA GCGGAGCACG GTCGGCTTCG TGTGGCAGCA GGCGGCCCGC
AACCTCCTGC CCTACCTGAC GGCCGTGCAG AACGTCGCGG TCCCGCTGAC CATCACCCGG
ACGGCCGGTC GGCGCGCGCG TGCCCTCGAG CTCCTCGACC TGCTGGGGGT GGCGCACTGC
CACGACAGGC TGCCGTCCCA GATGTCCGGC GGGCAGCAGC AGCGCGTCGC CATCGCGGTG
GCCGTCGCGA ACTCGCCCCG GGTCCTGCTC GCGGACGAGC CCACGGGCGA GCTCGACGAG
ACGACCTCGG GGGAGGTGCT CGACATGCTC CGGGCGGTCA ACGCCGAGAC CGGCGTGACG
ACGCTCATCG TCACCCACGA CCCGACGGTG TCGGAGCACG TCGCCCGCAC CGTCCAGATC
CGGGACGGCA GGACCTCGAC CGAGGTCCTG CGTCGTACCG AGCGCGCGGC CGACGGGTCC
GAGCGTCACG TCGCCGAGGA GTTCGCGGTG CTCGACCGTG TCGGGCGGTT CCAGCTGCCA
CCCGAGCACG TGGAGACCCT CGGGCTGCGC GACCGGGTGC GGCTCTCGCT CGAGGCGGAC
CACGTCCGGG TGTCTCCCGA CGGTGCTCCT CCCGCCGGCG GCTCGACCGA GCGGGCGCTG
CCTGCCGACC CGCGCGGGCG ACACGCCACG CCCGGGACGA CCGACCAGGG AGGACTCTCA
TGA
 
Protein sequence
MDSRTSTPPA ARHASAPALA AAPDAPDILC RDLVRIFVTE GLEVQALQGL NLRVDPGEIV 
AVVGASGSGK STLLSILSGL DRPTGGSAEV AGADLLALGR RARVEYQRST VGFVWQQAAR
NLLPYLTAVQ NVAVPLTITR TAGRRARALE LLDLLGVAHC HDRLPSQMSG GQQQRVAIAV
AVANSPRVLL ADEPTGELDE TTSGEVLDML RAVNAETGVT TLIVTHDPTV SEHVARTVQI
RDGRTSTEVL RRTERAADGS ERHVAEEFAV LDRVGRFQLP PEHVETLGLR DRVRLSLEAD
HVRVSPDGAP PAGGSTERAL PADPRGRHAT PGTTDQGGLS