Gene Sked_26090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_26090 
Symbol 
ID8634243 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp2895785 
End bp2897695 
Gene Length1911 bp 
Protein Length636 aa 
Translation table11 
GC content69% 
IMG OID 
ProductGTP-binding protein TypA/BipA 
Protein accessionYP_003315347 
Protein GI269795892 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.876916 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGTGC GCTCCGACCT GCGTAACGTC GCGATCGTCG CCCACGTCGA CCACGGTAAG 
ACCACCCTCG TCGACGCGAT GCTGCACCAG TCCGGCGCGT TCGGTTCGCA CGCGCACGTC
GACGAGCGCG CCATGGACTC CGGTGACCTC GAGCGCGAGA AGGGCATCAC GATCCTCGCG
AAGAACACCG CCGTGCACTA CGCGGGTCCT GCAGCGATCG CCGCCGGCCA GCCCGACGGC
ATCACCATCA ACGTGATCGA CACCCCGGGC CACGCCGACT TCGGTGGTGA GGTCGAGCGC
GGCCTGTCCA TGGTCGACGG TGTCGTCCTC CTCGTCGACG CGTCCGAGGG CCCGCTGCCC
CAGACGCGCT TCGTGCTCCG CAAGGCGCTC GTCGCCAAGC TCCCCGTGAT CCTCGTGGTC
AACAAGACCG ACCGCCCCGA CTCGCGCATC GAAGAGGTCG TCGCCGAGGC GACCGACCTC
CTCCTCGGCC TCGCGAGCGA CCTCGCGGAC GAGGTCCCCG ACCTCGACCT CGACGCGATC
CTCGACATGC CGGTCGTCTA CGCCGCGGCC AAGGTCGGCC GCGCGTCGAC CGAGCAGCCC
GCCGACGGCA CCGCCCCGGA GAACGAGGAC CTCGAGCCGC TCTTCAAGGT CATCCTCGAC
AAGATCCCCG CGCCGACCTA CGAGGAGGGC GCGCCGCTCC AGGCTCACGT CACCAACCTC
GACGCGTCGC CGTTCCTCGG CCGCCTCGCG CTGCTCCGCA TCTTCAACGG CACGATCAAC
AAGGGCCAGA CCGTGGCCTG GGCCCGTGCC GACGGCACGA TGCAGAACGT GAAGATCACC
GAGCTCCTCG AGACCAAGGC GCTCTCGCGC GTGCCCACGG ACTCCGCGGG CCCCGGTGAG
ATCGTCGCCG TCGCCGGCAT CGAGGACATC ACCATCGGCG AGACCCTCAC GGACCCCGAC
GACCCGCGTC CGCTGCCGCT CATCACGGTC GACGACCCGG CCATCTCCAT GACCATCGGT
ATCAACACCT CCCCGCTCGC GGGCAAGGGC GGCAAGGGCC ACAAGGTCAC CGCCCGCCAG
GTGAAGGACC GCCTCGACAA GGAGCTCATC GGCAACGTGT CGCTCCGCGT CCTGCCGACC
GAGCGTCCTG ACGCCTGGGA GGTCCAGGGC CGTGGAGAGC TCGCGCTCGC CATCCTCGTC
GAGCAGATGC GTCGCGAGGG CTTCGAGCTC ACCGTCGGCA AGCCGCAGGT CGTCACCCGC
ACCGTCGACG GCAAGCGCCA CGAGCCGATG GAGCGCATGA CCATCGACGT CCCCGAGGAG
TACCTCGGTG CCGTCACGCA GCTCCTCGCC CAGCGCAAGG GCCGCATGGA GACCATGTCG
AACCACGGCA CCGGCTGGGT CCGCATGGAG TTCGTCGTCC CCGCGCGTGG CCTCATCGGC
TTCCGCACCC GCTTCCTCAC CGACACGCGC GGCACCGGCA TCGCGTCGTC GATCGCCGAG
GGCTACGAGC CGTGGGCCGG CCCGATCGAG ACCCGTGTCA ACGGCTCGCT CGTCGCGGAC
CGCTCCGGCG TCGTCACCCC GTTCGCGATG ATCAACCTGC AGGAGCGCGG CTCCTTCTTC
GTCGACCCCA CGCAGGAGGT CTACGAGGGC ATGATCGTCG GCGAGAACTC GCGCAACGAG
GACATGGACG TCAACATCAC GAAGGAGAAG AAGCTCACCA ACATGCGTGC AGCGTCTTCT
GACACCTTCG AGAACCTCAC CCCGCCGAAG CACCTCACCC TCGAGGAGTC CCTCGAGTTC
GCCCGCGAGG ACGAGTGCGT CGAGGTCACC CCCGAGGTCG TGCGCATCCG CAAGGTCATC
CTCGACCAGA ACGAGCGCTC GCGCGCCTAC TCGCGCAACA AGAACGGCTG A
 
Protein sequence
MSVRSDLRNV AIVAHVDHGK TTLVDAMLHQ SGAFGSHAHV DERAMDSGDL EREKGITILA 
KNTAVHYAGP AAIAAGQPDG ITINVIDTPG HADFGGEVER GLSMVDGVVL LVDASEGPLP
QTRFVLRKAL VAKLPVILVV NKTDRPDSRI EEVVAEATDL LLGLASDLAD EVPDLDLDAI
LDMPVVYAAA KVGRASTEQP ADGTAPENED LEPLFKVILD KIPAPTYEEG APLQAHVTNL
DASPFLGRLA LLRIFNGTIN KGQTVAWARA DGTMQNVKIT ELLETKALSR VPTDSAGPGE
IVAVAGIEDI TIGETLTDPD DPRPLPLITV DDPAISMTIG INTSPLAGKG GKGHKVTARQ
VKDRLDKELI GNVSLRVLPT ERPDAWEVQG RGELALAILV EQMRREGFEL TVGKPQVVTR
TVDGKRHEPM ERMTIDVPEE YLGAVTQLLA QRKGRMETMS NHGTGWVRME FVVPARGLIG
FRTRFLTDTR GTGIASSIAE GYEPWAGPIE TRVNGSLVAD RSGVVTPFAM INLQERGSFF
VDPTQEVYEG MIVGENSRNE DMDVNITKEK KLTNMRAASS DTFENLTPPK HLTLEESLEF
AREDECVEVT PEVVRIRKVI LDQNERSRAY SRNKNG