| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_26080 |
|---|
| Symbol | |
|---|
| ID | 8634242 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | - |
|---|
| Start bp | 2894521 |
|---|
| End bp | 2895630 |
|---|
| Gene Length | 1110 bp |
|---|
| Protein Length | 369 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | |
|---|
| Product | uncharacterized LmbE-like protein |
|---|
| Protein accession | YP_003315346 |
|---|
| Protein GI | 269795891 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCACCG AGACGACCCT GCCCGACGGC CCCCTGCTCG TCGTGCACGC GCACCCCGAC
GACGAGACGC TCGCGACCGG CGGGCTGCTC GCGACCTGGG CGGCCAGCGG GCAGCCGGTC
ACGCTCGTGA CCTGCACCCG CGGTGAGCGC GGCGAGGTCA TCGGGACCGC GCTGTCCCAC
CTCGAGGGAG ACGGTGCTGC TCTCGCCGCC CACCGCGAGA CCGAGCTCGC CGCCGCGCTG
GCCTCTCTCG GGGTCACCGA CCACGCGTTC CTCGACTCCG TGCCCCCGGC AGCCGACGCG
CTCACCAGCC GCGCGCGCCT CGAGGACTCC GGCATGGCCT GGGTCGGCGA CGGCGCACCG
GGCGCCACGG GCCAGGCAGG AGCCGCGACC GAGGTCCCGC CGGGCGCACT GGTCCGGGCC
TCGGTCGAGG AGTGCGCCGA GCGGCTCGCG ACGGTCCTGC GGGACCGACG CCCCACGGTC
GTCGTCACCT ACGAGCCCGG CGGAGGGTAC GGGCACCCGG ACCACGTCCG CGCCCACGAG
ATCACCGTCC GGGCGCTGTC CCTCGCCGCG CAGGACGCGA CCACGGGGAC GGAGACCGTC
CCCGGGCACC AGCCCGCGCA CGTGTGGTGG GTCGTGGTCC CTCCTGCCGT CCTCACCGCC
GCCCGTGCCG ACCTCGCCCG GCGTGCCACC GAGGACCCGT GGTTCCAGGC TCTCCTCGAC
TCGCAGCCGA CCGCCGCGCT GCCGCAGGGC CCGCTGCCCG CGGTCGCCGA GCCCGCACGG
GACGTCGTCG CGACCGTCGA CGTGCGGCCC GTCCTCGAGC AGGTGCGCGG AGCGCTCACC
GCGCACGCGA CCCAGGTGCA CTGGGTCGAC ACGGTCGCGC CGGCGCCCGC GGACGACTCC
GAGCCGGGCG AGGCTGCTCT GGCCACGGCG GCGCCGGGCT CGTTGCTCGG CTGGTACGCG
CTGAGCAACG ACGTGATCGT CCCGTGGCTC ACCCACGAGC ACTACGCCGA CGCGACCGCG
ACCGTCTCCG CGCCGGTCGC CGGTCCGGCT GCCGGGCCAG ACGGCGGCGT CGCGAGCGAG
GTCCAGGCGA CCCCCAGCAG CGACCGGTAG
|
|---|
| Protein sequence | MITETTLPDG PLLVVHAHPD DETLATGGLL ATWAASGQPV TLVTCTRGER GEVIGTALSH
LEGDGAALAA HRETELAAAL ASLGVTDHAF LDSVPPAADA LTSRARLEDS GMAWVGDGAP
GATGQAGAAT EVPPGALVRA SVEECAERLA TVLRDRRPTV VVTYEPGGGY GHPDHVRAHE
ITVRALSLAA QDATTGTETV PGHQPAHVWW VVVPPAVLTA ARADLARRAT EDPWFQALLD
SQPTAALPQG PLPAVAEPAR DVVATVDVRP VLEQVRGALT AHATQVHWVD TVAPAPADDS
EPGEAALATA APGSLLGWYA LSNDVIVPWL THEHYADATA TVSAPVAGPA AGPDGGVASE
VQATPSSDR
|
|---|
| |