| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_25960 |
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| Symbol | |
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| ID | 8634230 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sanguibacter keddieii DSM 10542 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013521 |
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| Strand | - |
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| Start bp | 2882110 |
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| End bp | 2883189 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | |
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| Product | succinyl-diaminopimelate desuccinylase |
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| Protein accession | YP_003315334 |
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| Protein GI | 269795879 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.129356 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.963419 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTCGACC TCACCGGAGG CGTGGTCGAG CTCACCCGGG CCCTCTGCGA CATCCCCTCG
GTGAGCGGCG ACGAGCGTGC CGTCGCCGAC GCGGTGGAGG CGGCGCTCTC GGGCCTCACG
CACCTCGAGG TCGTCCGCGA CGGCGACGCC GTGGTCGCGC GGACCACGCT GGGCCGCGCA
GAGCGCGTGG TCGTCGCCGG GCACCTCGAC ACGGTCCCGG TCGCCGACAA CCTCCCCGTG
CGCGTCGTGG GCGAGGGTGT CCACGCCGAG CTCTGGGGAC GGGGGACCGT CGACATGAAG
GGCGGCGTCG CCGTCCAGCT CGCGCTGGCC GCCGAGCTCG TGGAGCCGAC GCGCGACGTC
ACCTGGGTGT TCTACGACCA CGAGGAGGTC GAGTCCTCCC TCAACGGTCT CGGCCGCATC
GTCCGGACCC GACCCGAGCT GCTCGAGGGC GACTTCGCCG TGCTCTGCGA GCCCACGGCC
GCGGGGATCG AGGGCGGCTG CAACGGCACC CTGCGCGTCG AGGTCCGCGT CCCCGGGGAG
GCCGCGCACT CGGCGCGCTC CTGGATGGGG ACCAACGCGA TCCACGGGGC GGCCGAGGTC
CTGACCCGGC TCGCCGCGTA CGAGCCGGCC TCGACCGAGG TCGAGGGGCT CGTGTTCCGC
GAGGGCATGA ACGCCGTCGG CGTGCGCGGC GGCATCGCCG GGAACGTCAT CCCGGACGAG
TGCGTCGTGA CCGTGAACTT CCGCTTCGCG CCGTCGCGCT CGCTCGCCGA GGCGGAGCAG
CACACGCGCG ACCTCTTCGA GGGCTTCGAC GTCACGGTCA CCGACGCGGC GGCCGGGGCC
CGCCCCGGGC TCGACGCGCC GCTCGCCGTC GACTTCACCG AGGCGGTGCT CGAGGTCACC
GGCGGCGCCC CCGCCCCCAA GTACGGCTGG ACGGACGTGG CGCGCTTCTC CGAGCTCGGC
GTCCCCGCGG TGAACTTCGG CCCCGGTGAC CCGCTGCTCG CCCACAAGGA CGACGAGCAC
TGCCCGGCGT CGCAGATCGT GCTCTGCTAC GAGGCGCTGC GCACCTGGCT GCTGCGCTGA
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| Protein sequence | MLDLTGGVVE LTRALCDIPS VSGDERAVAD AVEAALSGLT HLEVVRDGDA VVARTTLGRA
ERVVVAGHLD TVPVADNLPV RVVGEGVHAE LWGRGTVDMK GGVAVQLALA AELVEPTRDV
TWVFYDHEEV ESSLNGLGRI VRTRPELLEG DFAVLCEPTA AGIEGGCNGT LRVEVRVPGE
AAHSARSWMG TNAIHGAAEV LTRLAAYEPA STEVEGLVFR EGMNAVGVRG GIAGNVIPDE
CVVTVNFRFA PSRSLAEAEQ HTRDLFEGFD VTVTDAAAGA RPGLDAPLAV DFTEAVLEVT
GGAPAPKYGW TDVARFSELG VPAVNFGPGD PLLAHKDDEH CPASQIVLCY EALRTWLLR
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