| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_25880 |
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| Symbol | |
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| ID | 8634222 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sanguibacter keddieii DSM 10542 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013521 |
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| Strand | - |
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| Start bp | 2874024 |
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| End bp | 2875637 |
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| Gene Length | 1614 bp |
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| Protein Length | 537 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | |
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| Product | trypsin-like serine protease with C-terminal PDZ domain |
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| Protein accession | YP_003315326 |
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| Protein GI | 269795871 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCGATC CGAGCACGGA CGACCCCACG AGCGAGGCCG CCGGCCCACC GTCGCAGCCG
CAGGGCGACC CGGGGCGCAG CGTCCTCCCG GTCCCGCTCC CGCCTGTCCA CGCGGCGCCG
TCGTACCAGC CGCGTCAGGA GGGTTCGCCG ACGCCCCCGG AGCACCTGCG CTACGCGCCT
CCGGCTGCCC GACCGGCGAC GCCCGAGCAG CCGGCCCACC CGCAGCCGGC CGAGCCGCAG
GCAGGCGGGG ACCGGCTGGG GGCCGAGGCC GGTGCCATCG CCGCCGAGCA CGGAGCGCCG
GGAGGAACAG GTCCAGACCA CGAGCCGTCA CCCGTCGAGA CGCTCGCAGC AGGCCCGGTG
GCCGACGGCG CGCAGGGCGT CCCCGTGGCA CCGTCGTCCT CCCCGCTCCG ACCTCCGTCC
TACGCGCCCG GGGCGACCCC GAGCGCGCAC TGGTTCGAGT CCGCCGCCAC GCAGCAGGAG
GCGCTGGTCG TGACGGGGAC GCCCTCGGAG CAGCGGAAGG GTGGTCGTCG GCCCGCCGTG
ACCGGGCTGC TCGTCGGTGC GCTCCTGCTC GGGGCCGTCG GCGGCATCGC TGGCGAACGC
GTCTGGGACG CGGTGACGGG CCCGACCGCA GGGCAGCCGC TGCCGACGGT CTCCGCGGAC
CCGTCGATCA CCCGTCCCGA CGGGTCGATC GCCGACATCG CCGCGACGGT CGCCCCGAGC
GTCGTCTCGC TCTACGTCTC CGGACCGGAC GGTCAGTCGA CCGGCTCCGG CTTCATCATC
CGCGAGGACG GCTACATCCT CACCAACAAC CACGTGATCG CCGGTGCCGT GGGCGCCGGG
ACCATCCGCG TGACCTTCGT CGACGGCACC GAGGAGACCG CGACCCTCAT CGGTCGGACG
GCCGACTACG ACCTCGCCGT GGTGCGCGTG GACCGCGAGG GCCTCGTGCC GCTCGTCCTC
GGAGACTCGG ACGCGGTCGC GGTGGGAGAC CCGGTCATCG CGATCGGCGC CCCGCTCGGT
CTGGACGGGA CGGTGACCTC CGGGATCATC AGCGCGCTCA ACCGGCCGGT CTCCGCCGGC
GACGCGACCG ACCAGGCCTT CATCAACGCG CTCCAGACCG ACGCGGCGAT CAACCCGGGG
AACTCGGGCG GCCCGCTGGT CGACGGCTCG GGGCAGGTCA TCGGGATCAA CTCGGCGATC
GCGCAGCCGC CCGGCACCTT CACGAGCGCG GGGAACATCG GGCTCGGCTT CGCCATCGGG
TCCAACCAGG CGCGGCGGAC TGCGCAGGAG ATCATCGACA CGGGCTCGGC CAGCTACCCG
ATCATCGGGG TGCTGCTGGA CTCGGCGTAC GACGGCGAGG GCGTCCAGGT GGTGCAGGAC
TCCCAGGGCG ACCAGCCCCC GGTGACCCCC GGTGGTCCTG CCGAGGCGGC GGGCATCGCC
CCGGGCGACG TGATCCTGGC CGTCGACGGC CGTCCGGTCA CGCAGTCCGA CGAGCTCATC
GTCGCGATCC GGGCGAAGGC ACCCGGCGAC ACTGTTGTGC TGCGCGTGCG CTCCGGCGAT
GATGAGCGGG ACGTGTCGAT AGTGCTCGAC AAGGCGACGA GCGGCGAGGG TTGA
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| Protein sequence | MTDPSTDDPT SEAAGPPSQP QGDPGRSVLP VPLPPVHAAP SYQPRQEGSP TPPEHLRYAP
PAARPATPEQ PAHPQPAEPQ AGGDRLGAEA GAIAAEHGAP GGTGPDHEPS PVETLAAGPV
ADGAQGVPVA PSSSPLRPPS YAPGATPSAH WFESAATQQE ALVVTGTPSE QRKGGRRPAV
TGLLVGALLL GAVGGIAGER VWDAVTGPTA GQPLPTVSAD PSITRPDGSI ADIAATVAPS
VVSLYVSGPD GQSTGSGFII REDGYILTNN HVIAGAVGAG TIRVTFVDGT EETATLIGRT
ADYDLAVVRV DREGLVPLVL GDSDAVAVGD PVIAIGAPLG LDGTVTSGII SALNRPVSAG
DATDQAFINA LQTDAAINPG NSGGPLVDGS GQVIGINSAI AQPPGTFTSA GNIGLGFAIG
SNQARRTAQE IIDTGSASYP IIGVLLDSAY DGEGVQVVQD SQGDQPPVTP GGPAEAAGIA
PGDVILAVDG RPVTQSDELI VAIRAKAPGD TVVLRVRSGD DERDVSIVLD KATSGEG
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