| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_25790 |
|---|
| Symbol | |
|---|
| ID | 8634213 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | - |
|---|
| Start bp | 2865485 |
|---|
| End bp | 2866630 |
|---|
| Gene Length | 1146 bp |
|---|
| Protein Length | 381 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | |
|---|
| Product | mannose-1-phosphate guanylyltransferase (GDP) |
|---|
| Protein accession | YP_003315317 |
|---|
| Protein GI | 269795862 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.465825 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCTCCT CGTCGCCGCA GCCTGCCCGT CCGGACCAGC CGAGCACCCC GTTCTACGCC
GTGATCCCTG CCGGCGGCGC GGGCACCCGG CTCTGGCCGC TGTCGCGGGC GGACGAGCCC
AAGTTCCTGC ACGACCTCAC CGGGTCGGGG CGGTCGCTCA TCCAGGCGAC GGTCGACAGG
GTCTCGCCGC TGACGGTGCC CGACGGCGTC GTGGTCGTCA CGGGCACGGC GCACGCGCCG
AAGATCGCCG CGCAGCTCCC CGACCTGCCG GCCGAGAACA TCCTCACCGA GACGTCCCCG
CGCGACTCGA TGGCCGCCAT CGGTCTCGCC GCCGCCGTGC TGCAGGAGCG CCACGGTGAC
GTCGTCCTCG GGTCCTTCGC CGCCGACCAG GTGATCGCCG GGCGCGACGC CTTCGAGCAG
GCGGTCCGCG AGGGGATCGC CGCGGCCGAG GAGGGCTACG TCGTCACCAT CGGCATCGCG
GCGTCCCGGC CGTCGACGGC CTTCGGGTAC ATCCACGGCG GGCAGCCGCT CGGCCTGGCC
GGTGCGCCGA GCGCCCGCCA CGTCCTCGGC TTCACCGAGA AGCCCGACGC CCTCACCGCC
CAGCGGTACC TCGCGACGGG GGAGTACCGC TGGAACGCGG GCATGTTCAT CACGCGCGCC
TCGGTCCTCC TCGGTCACCT CGCCGAGCAG CGCCCCGAGC TGCACGACGG CCTGCGCACC
ATCGCGCGCG CCTGGGACAC CCCGGAGCGC GACGAGGTCG TCGCCCGGGT GTGGCCCGCC
CTCGAGAAGA TCGCCATCGA CCACGCCGTC GCCGAGCCCG TCGCAGCGCA GGGCGGGGTC
GTCGTGGTCC CCGGCACCTT CGGCTGGGAC GACGTCGGCG ACTTCAACTC CCTCGCCGCG
CTCCTGCCCT CCGAGGACGG CTCCGGCTCC AAGGTGCTCG GCGACCCCGG CCTGGTGGTC
CGCGTGCAGA GCGCCGGCTC GGTCGTCGTC CCGGGCGGCA AGCGCGTCGT GACCGTGCTC
GGCCTCGACG ACGTCGTGGT GGTCGACACC CCCGACGCCA TCCTCGTCAC CACCCGCGCC
CGCGCGCAGC AGGTCAAGGA CATCGTCACC GAGCTCCGAG AGCGCGGCCT CGACGAGCTG
CTGTGA
|
|---|
| Protein sequence | MSSSSPQPAR PDQPSTPFYA VIPAGGAGTR LWPLSRADEP KFLHDLTGSG RSLIQATVDR
VSPLTVPDGV VVVTGTAHAP KIAAQLPDLP AENILTETSP RDSMAAIGLA AAVLQERHGD
VVLGSFAADQ VIAGRDAFEQ AVREGIAAAE EGYVVTIGIA ASRPSTAFGY IHGGQPLGLA
GAPSARHVLG FTEKPDALTA QRYLATGEYR WNAGMFITRA SVLLGHLAEQ RPELHDGLRT
IARAWDTPER DEVVARVWPA LEKIAIDHAV AEPVAAQGGV VVVPGTFGWD DVGDFNSLAA
LLPSEDGSGS KVLGDPGLVV RVQSAGSVVV PGGKRVVTVL GLDDVVVVDT PDAILVTTRA
RAQQVKDIVT ELRERGLDEL L
|
|---|
| |