Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_25730 |
Symbol | |
ID | 8634207 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | - |
Start bp | 2858068 |
End bp | 2859345 |
Gene Length | 1278 bp |
Protein Length | 425 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | nucleoside ABC transporter membrane protein |
Protein accession | YP_003315311 |
Protein GI | 269795856 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.465825 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.436724 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGCCA CCGACGTCCT GGTCGGCGAC GTGTCGACCA CCCGTCCCGT CCGCGCGTAC CGTCTGCCGA TCGTCCTCGC GAGCTTCGGC GTCCTGTCGC TCGTGGTGTT CGGCGTGCTC GGCAGCGCCG GGTCGACGAC CACCTTCGGC GTCTCGACGT CGACGGACTT CTTCATGATC GACCCGATCC GGCTGCCGTC GCAGGTCACG GCCACGGTCC TGTCGGTCCT CGCGCTGCTG CTCGCCGCGT ACTCGTTCTT GCGGGTCCGT CAGGGGCTGC GCGTGGGCAC GTGGGTCCCC GTCGTGTTCG GCGTCATCTG GGTCTTCACC TTCCTCGTCT GGGCGGTGAC CGACAAGAGC ACCTCGCTCG TCAGCCTCTT CCAGGGGTCG CTGCTCCTCG CCGTGCCTCT CGCCTTCGGC GCCCTCGGCG GTCTGCTCAA CGAGCGTGCC GGTGTGGTCA ACATCGCGAT CGAGGGACAG CTGCTCCTCG GGGCCTTCGG CGCAGCGGTC TTCGGGTCGA TCACCGGGAA CGCCTACCTG GGTCTCGTCG CAGCCCCGGT CGCGGGTCTG CTCATCGGCT CGCTGCTCGC GCTCTTCACC GTCAAGTACT CGGTGAACCA GATCATCGTC GGTGTGGTGC TCAACGTGTT CGCCGTCGGG CTCACCAGCT TCCTGTTCAG CTCGGTCCTC AAGGAGAACG CGGCGACCCT CAACTCGCCG CCGCGCCTGT CGACCCTGCC GATCCCGCTG CTCTCCGAGA TCCCCGTCCT CGGGCCTGTG CTGTTCCGCC AGTCGATCAT CGTGTACCTG CTGTACATCG CGGTGGCCGT CATCGCCGTC GCGCTGTTCC GCACCCGCTG GGGCCTGCGG GTCCGCGCGG TGGGAGAGCA CCCGCAGGCT GCGGACACCG TGGGCATCAA CGTCAACAAG ACGCGCTGGG GCAACGTGCT CCTCGGCTCG GCCGTGGCCG GTCTCGGCGG GGCGTTCTTC ACGCTCGGCT CCGTCGGTGC CTTCGGCCAG GAGATGACCG CGGGCAAGGG CTACATCGCC CTCGCCGCGA TGATCCTCGG CCGCTGGTCA CCGGTCGGTG CTCTCGGCGC GGCGCTGCTG TTCGGCTTCG CCGACAAGCT CCAGCAGGTG CTCGGGGTCC TCGAGACCCC GATCCCCAAC CAGTTCATGC TCATGCTCCC GTACGTGGTG ACGATCTTCG CGGTCGCCGG CCTCGTCGGA CGCGTCCGTG GACCGGCTGC CGCCGGCGAG CCCTACGTGA AGGGCTGA
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Protein sequence | MTATDVLVGD VSTTRPVRAY RLPIVLASFG VLSLVVFGVL GSAGSTTTFG VSTSTDFFMI DPIRLPSQVT ATVLSVLALL LAAYSFLRVR QGLRVGTWVP VVFGVIWVFT FLVWAVTDKS TSLVSLFQGS LLLAVPLAFG ALGGLLNERA GVVNIAIEGQ LLLGAFGAAV FGSITGNAYL GLVAAPVAGL LIGSLLALFT VKYSVNQIIV GVVLNVFAVG LTSFLFSSVL KENAATLNSP PRLSTLPIPL LSEIPVLGPV LFRQSIIVYL LYIAVAVIAV ALFRTRWGLR VRAVGEHPQA ADTVGINVNK TRWGNVLLGS AVAGLGGAFF TLGSVGAFGQ EMTAGKGYIA LAAMILGRWS PVGALGAALL FGFADKLQQV LGVLETPIPN QFMLMLPYVV TIFAVAGLVG RVRGPAAAGE PYVKG
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