Gene Sked_25730 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_25730 
Symbol 
ID8634207 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp2858068 
End bp2859345 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content69% 
IMG OID 
Productnucleoside ABC transporter membrane protein 
Protein accessionYP_003315311 
Protein GI269795856 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.465825 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.436724 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCA CCGACGTCCT GGTCGGCGAC GTGTCGACCA CCCGTCCCGT CCGCGCGTAC 
CGTCTGCCGA TCGTCCTCGC GAGCTTCGGC GTCCTGTCGC TCGTGGTGTT CGGCGTGCTC
GGCAGCGCCG GGTCGACGAC CACCTTCGGC GTCTCGACGT CGACGGACTT CTTCATGATC
GACCCGATCC GGCTGCCGTC GCAGGTCACG GCCACGGTCC TGTCGGTCCT CGCGCTGCTG
CTCGCCGCGT ACTCGTTCTT GCGGGTCCGT CAGGGGCTGC GCGTGGGCAC GTGGGTCCCC
GTCGTGTTCG GCGTCATCTG GGTCTTCACC TTCCTCGTCT GGGCGGTGAC CGACAAGAGC
ACCTCGCTCG TCAGCCTCTT CCAGGGGTCG CTGCTCCTCG CCGTGCCTCT CGCCTTCGGC
GCCCTCGGCG GTCTGCTCAA CGAGCGTGCC GGTGTGGTCA ACATCGCGAT CGAGGGACAG
CTGCTCCTCG GGGCCTTCGG CGCAGCGGTC TTCGGGTCGA TCACCGGGAA CGCCTACCTG
GGTCTCGTCG CAGCCCCGGT CGCGGGTCTG CTCATCGGCT CGCTGCTCGC GCTCTTCACC
GTCAAGTACT CGGTGAACCA GATCATCGTC GGTGTGGTGC TCAACGTGTT CGCCGTCGGG
CTCACCAGCT TCCTGTTCAG CTCGGTCCTC AAGGAGAACG CGGCGACCCT CAACTCGCCG
CCGCGCCTGT CGACCCTGCC GATCCCGCTG CTCTCCGAGA TCCCCGTCCT CGGGCCTGTG
CTGTTCCGCC AGTCGATCAT CGTGTACCTG CTGTACATCG CGGTGGCCGT CATCGCCGTC
GCGCTGTTCC GCACCCGCTG GGGCCTGCGG GTCCGCGCGG TGGGAGAGCA CCCGCAGGCT
GCGGACACCG TGGGCATCAA CGTCAACAAG ACGCGCTGGG GCAACGTGCT CCTCGGCTCG
GCCGTGGCCG GTCTCGGCGG GGCGTTCTTC ACGCTCGGCT CCGTCGGTGC CTTCGGCCAG
GAGATGACCG CGGGCAAGGG CTACATCGCC CTCGCCGCGA TGATCCTCGG CCGCTGGTCA
CCGGTCGGTG CTCTCGGCGC GGCGCTGCTG TTCGGCTTCG CCGACAAGCT CCAGCAGGTG
CTCGGGGTCC TCGAGACCCC GATCCCCAAC CAGTTCATGC TCATGCTCCC GTACGTGGTG
ACGATCTTCG CGGTCGCCGG CCTCGTCGGA CGCGTCCGTG GACCGGCTGC CGCCGGCGAG
CCCTACGTGA AGGGCTGA
 
Protein sequence
MTATDVLVGD VSTTRPVRAY RLPIVLASFG VLSLVVFGVL GSAGSTTTFG VSTSTDFFMI 
DPIRLPSQVT ATVLSVLALL LAAYSFLRVR QGLRVGTWVP VVFGVIWVFT FLVWAVTDKS
TSLVSLFQGS LLLAVPLAFG ALGGLLNERA GVVNIAIEGQ LLLGAFGAAV FGSITGNAYL
GLVAAPVAGL LIGSLLALFT VKYSVNQIIV GVVLNVFAVG LTSFLFSSVL KENAATLNSP
PRLSTLPIPL LSEIPVLGPV LFRQSIIVYL LYIAVAVIAV ALFRTRWGLR VRAVGEHPQA
ADTVGINVNK TRWGNVLLGS AVAGLGGAFF TLGSVGAFGQ EMTAGKGYIA LAAMILGRWS
PVGALGAALL FGFADKLQQV LGVLETPIPN QFMLMLPYVV TIFAVAGLVG RVRGPAAAGE
PYVKG