Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_25650 |
Symbol | |
ID | 8634199 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | - |
Start bp | 2849243 |
End bp | 2852491 |
Gene Length | 3249 bp |
Protein Length | 1082 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | |
Product | FG-GAP repeat protein |
Protein accession | YP_003315303 |
Protein GI | 269795848 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.112985 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.313827 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGAGTC TCGACCCACG TCGGACGAGG AGCGGGGCGC TGGCCCTGGC CGTCGCCTCG GCGCTCGTCC TCACCAGCAC CGCGGCGCTC GCCTCCCCAG GGGCAGCTCC CGGCGCCGCG ACGGCAGCCG GCCCGCTCGC CACCGCAGCA GACGGCGCCG CGACCGTGCC TCGTCTCGAG CACCTCGACC GCGGCCTCGT CGCGGCCCTC ACCGACGAGG GCGTCTTCGT CGGGTGGCGC CTGCTCGGCC AGGAGGTCTC CGGCTCCTCG GAGACCGGCA TGACCGGCTC CGACTTCGTC GTGTACCGCG ACGGCATGGC GATCGGCACG GTCACCGACA GCACGACCTT CCTCGACCCC GAGGGGTCGA CCGGGTCCGT CTACCAGGTC GCCGCTCTCG TCGACGGCGT CGAGCAGGAG CCCAGCGCCG AGGTCACGCC CTGGGCCGAC ACCTTCCGCG ACGTCCCGCT CGAGCGCCCG GCCGACGGCG TCACCCCGGT GGGCGAGACC TACACCTACT CCGCGAACGA CATGAGCGTC GGTGACGTCG ACGGCGACGG CACCTACGAG CTCGTGGTCA AGTGGGACCC GTCGAACGCG AAGGACGTCT CGCAGCGCGG CTACACCGGC CCGGTGTACG TCGACACCTA CCGGGTCGAC GGCACGCTCC TGCACCGGAT CGACCTCGGC GTCAACATCC GCGCGGGTGC CCACTACACC CAGTTCCTCG TCTACGACCT CGACGGCGAC GGCCGTGCCG AGATGATGCT CAAGACCGCG CCGGGCACCC GGTCGACCAC CTTCGACGCC GACGGCCAGG TGACGGCGGA GTCCTACGTG ACGATGCCGC AGTCCGACGT CGACGCGGGC TACACGCACG CCGACGACTA CCGCATGAGC GCCGACGACT ACCGCGAGCA CCTGGTCGAC ATGTTCATGG GGTGGTCGGA GCACCCCGAG GTCGTCTCGG GTGCGTGGCC CGCGACGCTC GCAGAGGCGC TGGCCCACCC CGAGCTCACG CCGCTGCCGG AGATGACGTA CCCGCTGTCC CAGGAGGACG CAGGCGAGGT CGCGGACTAC CTCATCGACG TGTACGCGCC GAAGCGGAGC ACGAACAACA AGCTCCGCGA GTTCGAGGGC TTCGTCGTCG ACGGACCCGA GTACCTCACC GTCTTCGACG GGGAGACCGG TGCGGAGCTG CAGACCGTGC CCTACACGCC CGAGCGCCAC GACGACGGGC TCATGTGGGG CGACTACGCG ATGTCCCGCA TCGAGCCCGG CAACCGCGTC GACAGGTTCC TGTCGACGGT CGCCTACCTC GACGGCGAGC GCCCGAGCGC CGTGTTCGCC CGCGGCTACT ACACACGCTC CGCCCTGGTC GCCTACGACT GGGACGGCAC GAACCTCACC GAGCGCTGGA CGGTCGACAG CGGCTGGACG CCCATGAGCA ACCCCTTCAA CGACGGGCCG CACGGTGTGG AGGGGACCGA CCCCGTCTTC GGCACCCTCA CCACCCAGGG CTTCCACTCG CTCAGCTCGG CCGACGTCGA CGGAGACGGC AAGCAGGAGA TCGTCTACGG CTCCGCGACG ATCGACAGCG ACGGGCAGTC GCTGCTCTAC AGCTCGTACG ACACGATCCC GGACGGCCCG AACGCCGGTG ACCTGGCCAA GCTCGGGCAC GGTGACGCGA TGCACGTGAC CGACATCGAC CCGGACCGCC CCGGTCTGGA GATCTTCACC GTGCACGAGG GCGGCGAGTG GGCGCCCTAC GGCTACGCCA TGCGCGACGC GAAGACCGGA GAGGTGCTCT TCGGTGCGTA CTCCGGCCGG GACACCGGGC GCGGCATGAT CGGTGACGTC GTCCCGGGGA ACCGCGGCAT CGAGGTGTGG GCCGGCATGC CGGACGGGAC CTCCGGTGCG GGGCTCCACT CGGCGCAGGG GGACCTCCTC ACCCCGGCGA CCCCGGGGAC GAACATGAGC ATCCTCTGGC AGCCGGACCT CACCCGTCAG GTCGTCGAGG GGTCGGGCAC GCAGACACCG GTGATCCGCG AGGTGGCGAC CGGCGACGCG CTGCTGACCG CGACCGGCAC CCTGACCAAC AACGGCACCA AGGGCACCCC GTCCCTGGTC GCCGACATCT TCGGCGACTG GCGCGAGGAG CTGCTGGTCC GCACCGAGGA CTCCTCGGCG ATCCGCATCT ACACGAGCGC GACGGTCTCG GGGACCAAGA TGTACACGCT CATGCACGAC CCGCAGTACC GGGCCGAGGT GGCGCGACAG CAGACCACGT ACAACCAGCC GTCGTACGTG GGGTTCTACC TCGCGTCCGG CATGACGGCC GAGGACTGGT CGCGCGTACC GGTGCCGACC ATCGTCACCG AGCCGACGCT GGCCGTCGGC GCGTCGGCCA CGTCGGCCGT GTCCGGCGAG CCGGTCGTCC TCGACGTGAC CGTCGGCTCG GGCTACCCGA CGGGCCCGTC GGGCGAGGTC GAGCTGGTGG TCGACGGCGC ACCGACCGGT GCGCCGGTGG CCCTCGTCGA CGGCGCCGTG GCCCTCGAGG TCCCGGCCCT GCCGGTCGGA GACCACAGCC TCGCCGTGCG GTACCTCGGT GACTCCCGCT ACTCGCCGGT CGAGAGCGGG ACGGTGCCGC TCGTCGTGGC GCAGGGCAGT GTCGACGTGC TGGTGGCGAC GGCGGGCCCC CCGGCGTCGG CAGGCTCCGC GGTGGCCTCC TCCGGTACCG CAGACCTGAC GGACGCCGGT GCCGCGGTCC TCGCGGCCAG CGCTGCCGAC CTCACGGTCT CGGTCGTCCC GCAGGCTCCC GCCGCGGGTG TCCCGACAGG TGCGGTCTCG GCCACGGTCG ACGGCGCGCC CGTCGAGGTG GCTGCCGAGC TCGTCGACGG TGCTGCCGTC CTCACGCTCC CGGACCTGCC GGTCGGTGAC CGGACGGTCG TGGTCACCTA CTCCGGTGAC GCGGCCTTCG TCGCGGCAGA GTCGGTGGCG CTGGTCGTCA CGGTGGCTGA CGACGGGACG GCCGTCCCGG TGCCGGTCCC GGTCGACCCG GGCCCCGGTG ACGAGGAGGG TGACCCTACG GAGCCCGCGG TGGCCGGAGC AGGTGCGGCC CAGCCCGGGT CGGGTCTCGC CGTCACCGGC GCCGACGTCA CGCTCCTCGC AGCCCTCGCG CTGCTGCTGG CTGCTGCCGG AGCCGTCACG GTCCGCACGG TACGACGACG TCGCGGGACC GCGGGCTGA
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Protein sequence | MMSLDPRRTR SGALALAVAS ALVLTSTAAL ASPGAAPGAA TAAGPLATAA DGAATVPRLE HLDRGLVAAL TDEGVFVGWR LLGQEVSGSS ETGMTGSDFV VYRDGMAIGT VTDSTTFLDP EGSTGSVYQV AALVDGVEQE PSAEVTPWAD TFRDVPLERP ADGVTPVGET YTYSANDMSV GDVDGDGTYE LVVKWDPSNA KDVSQRGYTG PVYVDTYRVD GTLLHRIDLG VNIRAGAHYT QFLVYDLDGD GRAEMMLKTA PGTRSTTFDA DGQVTAESYV TMPQSDVDAG YTHADDYRMS ADDYREHLVD MFMGWSEHPE VVSGAWPATL AEALAHPELT PLPEMTYPLS QEDAGEVADY LIDVYAPKRS TNNKLREFEG FVVDGPEYLT VFDGETGAEL QTVPYTPERH DDGLMWGDYA MSRIEPGNRV DRFLSTVAYL DGERPSAVFA RGYYTRSALV AYDWDGTNLT ERWTVDSGWT PMSNPFNDGP HGVEGTDPVF GTLTTQGFHS LSSADVDGDG KQEIVYGSAT IDSDGQSLLY SSYDTIPDGP NAGDLAKLGH GDAMHVTDID PDRPGLEIFT VHEGGEWAPY GYAMRDAKTG EVLFGAYSGR DTGRGMIGDV VPGNRGIEVW AGMPDGTSGA GLHSAQGDLL TPATPGTNMS ILWQPDLTRQ VVEGSGTQTP VIREVATGDA LLTATGTLTN NGTKGTPSLV ADIFGDWREE LLVRTEDSSA IRIYTSATVS GTKMYTLMHD PQYRAEVARQ QTTYNQPSYV GFYLASGMTA EDWSRVPVPT IVTEPTLAVG ASATSAVSGE PVVLDVTVGS GYPTGPSGEV ELVVDGAPTG APVALVDGAV ALEVPALPVG DHSLAVRYLG DSRYSPVESG TVPLVVAQGS VDVLVATAGP PASAGSAVAS SGTADLTDAG AAVLAASAAD LTVSVVPQAP AAGVPTGAVS ATVDGAPVEV AAELVDGAAV LTLPDLPVGD RTVVVTYSGD AAFVAAESVA LVVTVADDGT AVPVPVPVDP GPGDEEGDPT EPAVAGAGAA QPGSGLAVTG ADVTLLAALA LLLAAAGAVT VRTVRRRRGT AG
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