Gene Sked_25650 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_25650 
Symbol 
ID8634199 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp2849243 
End bp2852491 
Gene Length3249 bp 
Protein Length1082 aa 
Translation table11 
GC content72% 
IMG OID 
ProductFG-GAP repeat protein 
Protein accessionYP_003315303 
Protein GI269795848 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.112985 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.313827 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAGTC TCGACCCACG TCGGACGAGG AGCGGGGCGC TGGCCCTGGC CGTCGCCTCG 
GCGCTCGTCC TCACCAGCAC CGCGGCGCTC GCCTCCCCAG GGGCAGCTCC CGGCGCCGCG
ACGGCAGCCG GCCCGCTCGC CACCGCAGCA GACGGCGCCG CGACCGTGCC TCGTCTCGAG
CACCTCGACC GCGGCCTCGT CGCGGCCCTC ACCGACGAGG GCGTCTTCGT CGGGTGGCGC
CTGCTCGGCC AGGAGGTCTC CGGCTCCTCG GAGACCGGCA TGACCGGCTC CGACTTCGTC
GTGTACCGCG ACGGCATGGC GATCGGCACG GTCACCGACA GCACGACCTT CCTCGACCCC
GAGGGGTCGA CCGGGTCCGT CTACCAGGTC GCCGCTCTCG TCGACGGCGT CGAGCAGGAG
CCCAGCGCCG AGGTCACGCC CTGGGCCGAC ACCTTCCGCG ACGTCCCGCT CGAGCGCCCG
GCCGACGGCG TCACCCCGGT GGGCGAGACC TACACCTACT CCGCGAACGA CATGAGCGTC
GGTGACGTCG ACGGCGACGG CACCTACGAG CTCGTGGTCA AGTGGGACCC GTCGAACGCG
AAGGACGTCT CGCAGCGCGG CTACACCGGC CCGGTGTACG TCGACACCTA CCGGGTCGAC
GGCACGCTCC TGCACCGGAT CGACCTCGGC GTCAACATCC GCGCGGGTGC CCACTACACC
CAGTTCCTCG TCTACGACCT CGACGGCGAC GGCCGTGCCG AGATGATGCT CAAGACCGCG
CCGGGCACCC GGTCGACCAC CTTCGACGCC GACGGCCAGG TGACGGCGGA GTCCTACGTG
ACGATGCCGC AGTCCGACGT CGACGCGGGC TACACGCACG CCGACGACTA CCGCATGAGC
GCCGACGACT ACCGCGAGCA CCTGGTCGAC ATGTTCATGG GGTGGTCGGA GCACCCCGAG
GTCGTCTCGG GTGCGTGGCC CGCGACGCTC GCAGAGGCGC TGGCCCACCC CGAGCTCACG
CCGCTGCCGG AGATGACGTA CCCGCTGTCC CAGGAGGACG CAGGCGAGGT CGCGGACTAC
CTCATCGACG TGTACGCGCC GAAGCGGAGC ACGAACAACA AGCTCCGCGA GTTCGAGGGC
TTCGTCGTCG ACGGACCCGA GTACCTCACC GTCTTCGACG GGGAGACCGG TGCGGAGCTG
CAGACCGTGC CCTACACGCC CGAGCGCCAC GACGACGGGC TCATGTGGGG CGACTACGCG
ATGTCCCGCA TCGAGCCCGG CAACCGCGTC GACAGGTTCC TGTCGACGGT CGCCTACCTC
GACGGCGAGC GCCCGAGCGC CGTGTTCGCC CGCGGCTACT ACACACGCTC CGCCCTGGTC
GCCTACGACT GGGACGGCAC GAACCTCACC GAGCGCTGGA CGGTCGACAG CGGCTGGACG
CCCATGAGCA ACCCCTTCAA CGACGGGCCG CACGGTGTGG AGGGGACCGA CCCCGTCTTC
GGCACCCTCA CCACCCAGGG CTTCCACTCG CTCAGCTCGG CCGACGTCGA CGGAGACGGC
AAGCAGGAGA TCGTCTACGG CTCCGCGACG ATCGACAGCG ACGGGCAGTC GCTGCTCTAC
AGCTCGTACG ACACGATCCC GGACGGCCCG AACGCCGGTG ACCTGGCCAA GCTCGGGCAC
GGTGACGCGA TGCACGTGAC CGACATCGAC CCGGACCGCC CCGGTCTGGA GATCTTCACC
GTGCACGAGG GCGGCGAGTG GGCGCCCTAC GGCTACGCCA TGCGCGACGC GAAGACCGGA
GAGGTGCTCT TCGGTGCGTA CTCCGGCCGG GACACCGGGC GCGGCATGAT CGGTGACGTC
GTCCCGGGGA ACCGCGGCAT CGAGGTGTGG GCCGGCATGC CGGACGGGAC CTCCGGTGCG
GGGCTCCACT CGGCGCAGGG GGACCTCCTC ACCCCGGCGA CCCCGGGGAC GAACATGAGC
ATCCTCTGGC AGCCGGACCT CACCCGTCAG GTCGTCGAGG GGTCGGGCAC GCAGACACCG
GTGATCCGCG AGGTGGCGAC CGGCGACGCG CTGCTGACCG CGACCGGCAC CCTGACCAAC
AACGGCACCA AGGGCACCCC GTCCCTGGTC GCCGACATCT TCGGCGACTG GCGCGAGGAG
CTGCTGGTCC GCACCGAGGA CTCCTCGGCG ATCCGCATCT ACACGAGCGC GACGGTCTCG
GGGACCAAGA TGTACACGCT CATGCACGAC CCGCAGTACC GGGCCGAGGT GGCGCGACAG
CAGACCACGT ACAACCAGCC GTCGTACGTG GGGTTCTACC TCGCGTCCGG CATGACGGCC
GAGGACTGGT CGCGCGTACC GGTGCCGACC ATCGTCACCG AGCCGACGCT GGCCGTCGGC
GCGTCGGCCA CGTCGGCCGT GTCCGGCGAG CCGGTCGTCC TCGACGTGAC CGTCGGCTCG
GGCTACCCGA CGGGCCCGTC GGGCGAGGTC GAGCTGGTGG TCGACGGCGC ACCGACCGGT
GCGCCGGTGG CCCTCGTCGA CGGCGCCGTG GCCCTCGAGG TCCCGGCCCT GCCGGTCGGA
GACCACAGCC TCGCCGTGCG GTACCTCGGT GACTCCCGCT ACTCGCCGGT CGAGAGCGGG
ACGGTGCCGC TCGTCGTGGC GCAGGGCAGT GTCGACGTGC TGGTGGCGAC GGCGGGCCCC
CCGGCGTCGG CAGGCTCCGC GGTGGCCTCC TCCGGTACCG CAGACCTGAC GGACGCCGGT
GCCGCGGTCC TCGCGGCCAG CGCTGCCGAC CTCACGGTCT CGGTCGTCCC GCAGGCTCCC
GCCGCGGGTG TCCCGACAGG TGCGGTCTCG GCCACGGTCG ACGGCGCGCC CGTCGAGGTG
GCTGCCGAGC TCGTCGACGG TGCTGCCGTC CTCACGCTCC CGGACCTGCC GGTCGGTGAC
CGGACGGTCG TGGTCACCTA CTCCGGTGAC GCGGCCTTCG TCGCGGCAGA GTCGGTGGCG
CTGGTCGTCA CGGTGGCTGA CGACGGGACG GCCGTCCCGG TGCCGGTCCC GGTCGACCCG
GGCCCCGGTG ACGAGGAGGG TGACCCTACG GAGCCCGCGG TGGCCGGAGC AGGTGCGGCC
CAGCCCGGGT CGGGTCTCGC CGTCACCGGC GCCGACGTCA CGCTCCTCGC AGCCCTCGCG
CTGCTGCTGG CTGCTGCCGG AGCCGTCACG GTCCGCACGG TACGACGACG TCGCGGGACC
GCGGGCTGA
 
Protein sequence
MMSLDPRRTR SGALALAVAS ALVLTSTAAL ASPGAAPGAA TAAGPLATAA DGAATVPRLE 
HLDRGLVAAL TDEGVFVGWR LLGQEVSGSS ETGMTGSDFV VYRDGMAIGT VTDSTTFLDP
EGSTGSVYQV AALVDGVEQE PSAEVTPWAD TFRDVPLERP ADGVTPVGET YTYSANDMSV
GDVDGDGTYE LVVKWDPSNA KDVSQRGYTG PVYVDTYRVD GTLLHRIDLG VNIRAGAHYT
QFLVYDLDGD GRAEMMLKTA PGTRSTTFDA DGQVTAESYV TMPQSDVDAG YTHADDYRMS
ADDYREHLVD MFMGWSEHPE VVSGAWPATL AEALAHPELT PLPEMTYPLS QEDAGEVADY
LIDVYAPKRS TNNKLREFEG FVVDGPEYLT VFDGETGAEL QTVPYTPERH DDGLMWGDYA
MSRIEPGNRV DRFLSTVAYL DGERPSAVFA RGYYTRSALV AYDWDGTNLT ERWTVDSGWT
PMSNPFNDGP HGVEGTDPVF GTLTTQGFHS LSSADVDGDG KQEIVYGSAT IDSDGQSLLY
SSYDTIPDGP NAGDLAKLGH GDAMHVTDID PDRPGLEIFT VHEGGEWAPY GYAMRDAKTG
EVLFGAYSGR DTGRGMIGDV VPGNRGIEVW AGMPDGTSGA GLHSAQGDLL TPATPGTNMS
ILWQPDLTRQ VVEGSGTQTP VIREVATGDA LLTATGTLTN NGTKGTPSLV ADIFGDWREE
LLVRTEDSSA IRIYTSATVS GTKMYTLMHD PQYRAEVARQ QTTYNQPSYV GFYLASGMTA
EDWSRVPVPT IVTEPTLAVG ASATSAVSGE PVVLDVTVGS GYPTGPSGEV ELVVDGAPTG
APVALVDGAV ALEVPALPVG DHSLAVRYLG DSRYSPVESG TVPLVVAQGS VDVLVATAGP
PASAGSAVAS SGTADLTDAG AAVLAASAAD LTVSVVPQAP AAGVPTGAVS ATVDGAPVEV
AAELVDGAAV LTLPDLPVGD RTVVVTYSGD AAFVAAESVA LVVTVADDGT AVPVPVPVDP
GPGDEEGDPT EPAVAGAGAA QPGSGLAVTG ADVTLLAALA LLLAAAGAVT VRTVRRRRGT
AG