Gene Sked_25540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_25540 
Symbol 
ID8634188 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp2836239 
End bp2837621 
Gene Length1383 bp 
Protein Length460 aa 
Translation table11 
GC content75% 
IMG OID 
ProductTat-translocated enzyme 
Protein accessionYP_003315292 
Protein GI269795837 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.342813 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.166742 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCCCC ACGCCAGCCC CGACGACAAC CAGTCCGCTC CCGAGCCCGG GGAGCGACGC 
CAGGTGTCGC GACGCGGCGT GCTCGGCATC GCCGGCGCCG GACTCGTGGC GCTCGGTGCG
TCGGCCGCGA CGGGGTACGC CGCAGGCCGG CGAGACCCGG AGCCCGCACC GGCCTCCCGC
TCCTACCCGC TGACCGGCGA GCACCAGCCC GGCATCACGA CGCCCGCACA GGACCGCCTG
CACTTCGCGA CCTTCGACCT GCTCACCGAC GACCGCGACG ACGTGGTGGC CCTGCTGCGC
GCCTGGACCG CCGCGGCCGA CCGCATGATG CGCGGCCTGC CCGCCGGAGA GCTCGGCCCG
ACCTCGGGCC CGTACGACGC ACCGCCGGAC GACACCGGGG AGACCGAGGA CCTCGACGCC
TCGCACCTGA CCATCACCGT CGGGTTCGGC CCGTCCTTCT TCACCGACGC CGACGGCGCC
CCGCGCTTCG GTCTCGACGG TCGCCGGCCC GCGCTGCTCG AGGACCTGCC GCACTTCCCC
GCAGACGCCC TCGAGGACGC GCGCTGCGGC GGCGACATCG CCGTGCAGGC CTGCGCCGAC
GACCCCCAGG TCGCCGTGCA CGCGATCCGC AACCTCGCCC GCCTCGCCTT CGGCACCGCC
TCGGTGCGCT GGAGCCAGCT CGGGTACGGC CGCACCTCCA CCACGTCGAC GAGCCAGTCG
ACCCCGCGCA ACCTCTTCGG GTTCAAGGAC GGCACCGCCA ACGTCAAGGC CGAGGAGCCC
GAGGCTCTCG AGCAGCACGT GTGGGTGCAG CCCGAGGACG CCGGTCGCCG ACCCGACGAC
GCCACCTCCT CAGACCCTGC CCCGGACGAC GCCTGGCTCG CCGGCGGCTC GTACCTCGTC
GCCCGGCGCA TCCGCATGAC CATCGAGACC TGGGACCGCT CCTCCCTGCG CGAGCAGGAG
ACGGTCACCG GGCGCACCAA GGCGAGCGGC GCCCCGCTGT CGGGCGGCGA CGAGCACACC
GAGCCCGACT TCTCCCGGAC AGGCCGCGAC GACGTCCCCC TCATCGACCC CGCCTCGCAC
GTCGCCCTCG CGCACCCGAG CGCCAACGGT GGGGCCCGCC TCCTGCGCCG CGGCTACAAC
TACACGGACG GCTCGGACGG CCTCGGTCGC CTCGACGCGG GGCTGTTCTT CCTCTGCTAC
GTGCGCGACC CCGCCCGCCA GTACGTCCCG ATGCAGAACA CCCTGGCTCG CGACGACCTC
ATGAGCGAGT ACCTGCGGCA CACCGGGTCC GGCCTGTGGG CCGTCCCGCC CGGGCTGCCC
GACGGCTCGA CCACGGGCGG CGCCGACGGC GCCTACCTCG GGCAGACGCT CTTCGAGACG
TGA
 
Protein sequence
MTPHASPDDN QSAPEPGERR QVSRRGVLGI AGAGLVALGA SAATGYAAGR RDPEPAPASR 
SYPLTGEHQP GITTPAQDRL HFATFDLLTD DRDDVVALLR AWTAAADRMM RGLPAGELGP
TSGPYDAPPD DTGETEDLDA SHLTITVGFG PSFFTDADGA PRFGLDGRRP ALLEDLPHFP
ADALEDARCG GDIAVQACAD DPQVAVHAIR NLARLAFGTA SVRWSQLGYG RTSTTSTSQS
TPRNLFGFKD GTANVKAEEP EALEQHVWVQ PEDAGRRPDD ATSSDPAPDD AWLAGGSYLV
ARRIRMTIET WDRSSLREQE TVTGRTKASG APLSGGDEHT EPDFSRTGRD DVPLIDPASH
VALAHPSANG GARLLRRGYN YTDGSDGLGR LDAGLFFLCY VRDPARQYVP MQNTLARDDL
MSEYLRHTGS GLWAVPPGLP DGSTTGGADG AYLGQTLFET