Gene Sked_25300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_25300 
Symbol 
ID8634164 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp2812506 
End bp2813645 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content73% 
IMG OID 
Productmembrane-fusion protein 
Protein accessionYP_003315268 
Protein GI269795813 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.344012 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGCCC GGGAGAACTC GCCAGCCGGA GGACCCGGCC GCTCGCGCAC GACCCGCCGT 
GCGCTGCTCC TCGGTGCCTC GCTGGCTGCG GTCGGGCTCG TCCTCGGCGT CATCCTGGTC
GGCGGCTCGT CCGACGCGAC GACCACGGAC GACACCGCCG GGACCGTCGC GACGACCCCG
GTCGTCCGGG AGACGCTCGT CCGCAGCGAG AAGCACAAGG GCTCGGTGGG CTTCGGGGAA
CCCAGAGCCG TCGGGGCTCC CGAGGCCGGG GAGAGCGAGG ACGGTGCACG GACGGTCACC
TGGTTGCCCG AGGTCGGCGC GGTCGTCGAC CGAGGCCAGC AGCTCTGGCG GACGGACGAC
CGACCGACGC TCGCCCTCTT CGGAGAGCTC CCCGCCTACC GAGAGCTCGG CGTCGGCGAC
CGCGGGGCGG ACGTCTCCCA GCTCAAGGAG AACCTCACCG CGCTCGGCTA CACGGGCTTC
TCGGCTGACG ACAGGTACAC GCAAGCCACC TCTCGAGCGG TGTCCAGGTG GCAGAAGGAC
GTCGGTCTGC CGCAGACCGG GAGGCTGGGG CCCGAGCAGG TCACCGTCGT GCGTGGGCCG
GTCCGGGTGG CCTCCCGCTC GGTCGAGGTC GGCGCTCCAG CGGCGTCGAG CATGCTGACG
GTCACCGACG TCAGGCGCGT CGTCTCCTTC GACCTCGACC CGGCGAAGGA CGTGACGCCG
GACGTCGGAG CGCCGGCGAC CGTCGAGCTG CCGGGCGGCA CCAGGGCTCC GGGGTCCATC
TCCGCGGTCG GGCCCCCCGT CGACGAGGGC GGCGACGGCA AGAGCTCGGG TTCAGACGGC
CAGTCCGGTG GCGGGTCTGA CACGACCACG GTCACCGTCG AGGTCTCCCT CGACGACCCG
GCCCTGGTCG AGGGCCTCGA CGCCAGCCGC GTCGACATCG AGCTGGTCGT CGAGGAGCGA
CCAGACGTCC TCTCGGTCCC CGTCACGGCG CTCGTCGCGC TCGCGGAGGG AGGGCACGCG
GTCGAGGTCG GAGCCGACGA GCGCCGCCTG GTGCCGGTCA CCGTGGGGAT GTTCGCCTCC
GGGCGGGTCG AGGTCTCGGG CGAGCTCAGC GAGGGCGACG AGGTCGTGGT GCCCTCGTGA
 
Protein sequence
MTARENSPAG GPGRSRTTRR ALLLGASLAA VGLVLGVILV GGSSDATTTD DTAGTVATTP 
VVRETLVRSE KHKGSVGFGE PRAVGAPEAG ESEDGARTVT WLPEVGAVVD RGQQLWRTDD
RPTLALFGEL PAYRELGVGD RGADVSQLKE NLTALGYTGF SADDRYTQAT SRAVSRWQKD
VGLPQTGRLG PEQVTVVRGP VRVASRSVEV GAPAASSMLT VTDVRRVVSF DLDPAKDVTP
DVGAPATVEL PGGTRAPGSI SAVGPPVDEG GDGKSSGSDG QSGGGSDTTT VTVEVSLDDP
ALVEGLDASR VDIELVVEER PDVLSVPVTA LVALAEGGHA VEVGADERRL VPVTVGMFAS
GRVEVSGELS EGDEVVVPS