Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_25260 |
Symbol | |
ID | 8634160 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | - |
Start bp | 2808987 |
End bp | 2809478 |
Gene Length | 492 bp |
Protein Length | 163 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | |
Product | transcriptional regulator |
Protein accession | YP_003315264 |
Protein GI | 269795809 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.113734 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGCCAGACC ATGTCGACCG TGTGCTCTCC CAGTGGGCCG TCGAGCGCCC CGACCTCGAC GTCTCGGCGA TGGGGGTCAT CGGCCGGCTC GGCCGCGTCC AGCGGCTCGT CGACGCCAGC CTGCGAGCGA CCTTCGCGCG GCACGACCTG GACGCACCCT CCTTCGACGT CCTCGCCACC CTGCGCCGCA GCGGCGACGG CGGCCTCACC CCCGCGGGCC TCATGCGGTC GGGGATGGTC ACCTCGGGGG CGATCACCCA GCGGCTCGAC CGGCTCGAGG AGCGCGGCCT CGTGCGACGT GCGGCCTCCG ACGCCGACCG GCGCAGCGTG GTCGTGCAGC TCACGCCCGC GGGGCGCGAG CTCGTCGACG CCGCGCTGCC CGACCACGTC GCGACCGAGG AGCGGCTGCT CGCCGGGCTC GACCCGGCCC AGCGCGAGCA GCTCGCGAGC ACCCTCCGGA CGCTCCTCGA GCACCTCGGG GACGAGGCGT AG
|
Protein sequence | MPDHVDRVLS QWAVERPDLD VSAMGVIGRL GRVQRLVDAS LRATFARHDL DAPSFDVLAT LRRSGDGGLT PAGLMRSGMV TSGAITQRLD RLEERGLVRR AASDADRRSV VVQLTPAGRE LVDAALPDHV ATEERLLAGL DPAQREQLAS TLRTLLEHLG DEA
|
| |