Gene Sked_25260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_25260 
Symbol 
ID8634160 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp2808987 
End bp2809478 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content76% 
IMG OID 
Producttranscriptional regulator 
Protein accessionYP_003315264 
Protein GI269795809 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.113734 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCAGACC ATGTCGACCG TGTGCTCTCC CAGTGGGCCG TCGAGCGCCC CGACCTCGAC 
GTCTCGGCGA TGGGGGTCAT CGGCCGGCTC GGCCGCGTCC AGCGGCTCGT CGACGCCAGC
CTGCGAGCGA CCTTCGCGCG GCACGACCTG GACGCACCCT CCTTCGACGT CCTCGCCACC
CTGCGCCGCA GCGGCGACGG CGGCCTCACC CCCGCGGGCC TCATGCGGTC GGGGATGGTC
ACCTCGGGGG CGATCACCCA GCGGCTCGAC CGGCTCGAGG AGCGCGGCCT CGTGCGACGT
GCGGCCTCCG ACGCCGACCG GCGCAGCGTG GTCGTGCAGC TCACGCCCGC GGGGCGCGAG
CTCGTCGACG CCGCGCTGCC CGACCACGTC GCGACCGAGG AGCGGCTGCT CGCCGGGCTC
GACCCGGCCC AGCGCGAGCA GCTCGCGAGC ACCCTCCGGA CGCTCCTCGA GCACCTCGGG
GACGAGGCGT AG
 
Protein sequence
MPDHVDRVLS QWAVERPDLD VSAMGVIGRL GRVQRLVDAS LRATFARHDL DAPSFDVLAT 
LRRSGDGGLT PAGLMRSGMV TSGAITQRLD RLEERGLVRR AASDADRRSV VVQLTPAGRE
LVDAALPDHV ATEERLLAGL DPAQREQLAS TLRTLLEHLG DEA