| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_25250 |
|---|
| Symbol | |
|---|
| ID | 8634159 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | - |
|---|
| Start bp | 2808246 |
|---|
| End bp | 2808884 |
|---|
| Gene Length | 639 bp |
|---|
| Protein Length | 212 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | ATP-dependent Clp protease proteolytic subunit ClpP |
|---|
| Protein accession | YP_003315263 |
|---|
| Protein GI | 269795808 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.0560465 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCACCTCA CCACCACCCC CGAGACACCA CCCCCTGCCG GCGGCGCTCT CGCCGACCGG
CTGACCAGCG GCCTGATGTT CCGGCGCGTG GTCGTCGTCG GCCAGGAGAT CGACGACGAC
CTCGCCACCC GCGTGTGCAG CCAGCTGCTC CTGCTCTCGG CCGAGGACCC GGACGCCGAC
GTCGTCCTGC TGATCTCGTC GCCCGGCGGC TCCGTCTCGG CAGGCCTCGC GATGTACGAC
GTCATGCGGC TGATCCCCAA CGACGTGAGC ACCGTCGCCC TCGGCACGGC CGCGAGCATG
GGGCAGTTCT TACTCTCCGC CGGGACCCGC GGCAAGAGGT TCGCCCTGCC GCACGCACGC
GTCCTCATGC ACCAGGGCTC TGCGGGGCTC CAGGGTACGG CCGTCGACAT CGCCATCCAG
GCCGAGAACC TCGAGCACAC CAAGAAGGTC ATGCTCACGC TCATCGCCGA GCACACCGGC
CAGCCATACG ACCGCGTCGA GCGCGACTCC GACCGCGACC GGTGGTTCAC CGCCGACGAG
GCGCTCGACT ACGGGTTCGT CGACGCGGTC GCCACGGACC TCGTGCAGGT GCTCCCTGCC
CAGGGCCGCC GCCCCGCAGG CCTGGCCGGT GCACGGTGA
|
|---|
| Protein sequence | MHLTTTPETP PPAGGALADR LTSGLMFRRV VVVGQEIDDD LATRVCSQLL LLSAEDPDAD
VVLLISSPGG SVSAGLAMYD VMRLIPNDVS TVALGTAASM GQFLLSAGTR GKRFALPHAR
VLMHQGSAGL QGTAVDIAIQ AENLEHTKKV MLTLIAEHTG QPYDRVERDS DRDRWFTADE
ALDYGFVDAV ATDLVQVLPA QGRRPAGLAG AR
|
|---|
| |