Gene Sked_25030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_25030 
Symbol 
ID8634138 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp2786329 
End bp2787975 
Gene Length1647 bp 
Protein Length548 aa 
Translation table11 
GC content74% 
IMG OID 
ProductATPase component of ABC transporters with duplicated ATPase domain 
Protein accessionYP_003315242 
Protein GI269795787 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCATCTCG TCTGCGACTC CCTCTCCTTC GGCTACCCCG GCAGGCCCGT CCTGACCGAC 
GTCTCGCTCC GGGTGAGCGC GCACCAGCGG CTCGCGGTCG TCGGCGAGAA CGGCTCCGGC
AAGACCACGC TGCTGCGTCT CCTGGCGGGT GAGGTGCCCC CGGCCGGCGG TGAGGTCCGC
CGTGACGGCA CGCTCGCGGT GGTGTCGCAG GAGCTCGTGG TGCTCGACGG GCAGACTGTC
GGGGACCTGG TCGACGAGGC GCTGGCCGAC GTCCGCCGGA CCGCCGCAGA GCTCGACCGG
GCCAGCGCGG AGTTCGACCA CGAGGGGGCA CGGCTCGGGG AGCTCGCCGA CATCCTCGCA
CGGGTCGAGC ACCTCGCGGC GTGGGACGCC GAGCGCCGGG TCGACGTCGC CCTGACACGC
CTGGGTGCGT GCCGGGACCT CGAGCGACCG CTCGCGACCC TCTCGGTCGG GGAGCGCTTC
CGGGTGCGGC TCGCCTGCCG CCTCGCCGGC CGCGCCGACC TGCTCCTCCT CGACGAGCCG
ACCAACCACC TCGACCGCGA CGGCATCGGC TTCCTCACCC GGGAGCTCAC CGCGTGGACC
GGGGGAGTCG TCATCGTCAC GCACGACCGC CAGCTGCTCG ACGACGTCGC GACCGCCATC
CTCGACCTCG ACCCGTCGAT CGACGGCAAG CCCGTGCTCT ACGGCCAGCC GGGGTACCTG
TCGTACAGGT TCGCCAAGAA CCAGGCGCTG CACCGGTGGC GCCAGCGGTA CCGCGCCGAG
CGCAAGCGGG CGATCCAGCT CGCGGAGCGC CTCGACCAGT CGTACGAGGG TCTCTCCGAC
GAGTGGCGCC CGCCCAAGGG GTCGAACAAG AACCGCCGGG GGACGCGCGC CAGGATCCAC
GTCAAGGCTG CCGACCGCCT CGTCGAGAAG CTCGAGGCCG AGGCCGTCGA GGTCCCGCCC
CCGCCACCGA CGCTGCACTT CCCGGACCTG CCGTCCATGG AGCCGACCTG GGGAGCGGGG
GACCCGGTCG TGGAGGTCCG GAACCCGCGG GTCGACGGCG GCGAGGGCCG TCCCGCCCGG
CTCGACCTGC CCGGGCAGCG GGTCGTCGTG CCCGCCGCCG GGAGGCTGCT GGTCACCGGT
GCCAACGGCG CCGGCAAGTC GACGCTGCTC GGCGCCCTGG CCGGGACGGT GCCCCTGGAC
CGTGGCTACC GCACCGCGCT GTCGCGGTCC AGGATCGGCG TGGTCACCCA GGAGGGCGTC
CGGCGCACGG GCACGCCGGC CGCCGACGGG CACGCCCCGA CCTGCTTCGA CGAGTACGCG
GCGCTCGCCC TCGAGCTCCT CGCCTCGGGT GACCTCGACC CGAGCTACGT CGTCCCGGTC
GCGATGCTCG GCGTCCTGTC GGAGGAGGAC CTCGACCGGC CCGTCGCCGA GCTCTCGGTC
GGCCAGCGAC GACGCTTCGA CCTCGCGTGC GCGCTGCTCG CCGCCCCGCA CGTGCTGCTG
CTCGACGAGC CGACCAACCA CCTGTCGATC GACCTCGTCG ACGACCTCAC CCAGGCGCTG
CGCAGCACGT CGGCCGCCGT GGTCGTCGCG ACGCACGACC GTCGCATGCA GGACGACCTG
CACGACTGGC CGCGCCTGGA CCTCTAG
 
Protein sequence
MHLVCDSLSF GYPGRPVLTD VSLRVSAHQR LAVVGENGSG KTTLLRLLAG EVPPAGGEVR 
RDGTLAVVSQ ELVVLDGQTV GDLVDEALAD VRRTAAELDR ASAEFDHEGA RLGELADILA
RVEHLAAWDA ERRVDVALTR LGACRDLERP LATLSVGERF RVRLACRLAG RADLLLLDEP
TNHLDRDGIG FLTRELTAWT GGVVIVTHDR QLLDDVATAI LDLDPSIDGK PVLYGQPGYL
SYRFAKNQAL HRWRQRYRAE RKRAIQLAER LDQSYEGLSD EWRPPKGSNK NRRGTRARIH
VKAADRLVEK LEAEAVEVPP PPPTLHFPDL PSMEPTWGAG DPVVEVRNPR VDGGEGRPAR
LDLPGQRVVV PAAGRLLVTG ANGAGKSTLL GALAGTVPLD RGYRTALSRS RIGVVTQEGV
RRTGTPAADG HAPTCFDEYA ALALELLASG DLDPSYVVPV AMLGVLSEED LDRPVAELSV
GQRRRFDLAC ALLAAPHVLL LDEPTNHLSI DLVDDLTQAL RSTSAAVVVA THDRRMQDDL
HDWPRLDL