Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_25030 |
Symbol | |
ID | 8634138 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | - |
Start bp | 2786329 |
End bp | 2787975 |
Gene Length | 1647 bp |
Protein Length | 548 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | |
Product | ATPase component of ABC transporters with duplicated ATPase domain |
Protein accession | YP_003315242 |
Protein GI | 269795787 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGCATCTCG TCTGCGACTC CCTCTCCTTC GGCTACCCCG GCAGGCCCGT CCTGACCGAC GTCTCGCTCC GGGTGAGCGC GCACCAGCGG CTCGCGGTCG TCGGCGAGAA CGGCTCCGGC AAGACCACGC TGCTGCGTCT CCTGGCGGGT GAGGTGCCCC CGGCCGGCGG TGAGGTCCGC CGTGACGGCA CGCTCGCGGT GGTGTCGCAG GAGCTCGTGG TGCTCGACGG GCAGACTGTC GGGGACCTGG TCGACGAGGC GCTGGCCGAC GTCCGCCGGA CCGCCGCAGA GCTCGACCGG GCCAGCGCGG AGTTCGACCA CGAGGGGGCA CGGCTCGGGG AGCTCGCCGA CATCCTCGCA CGGGTCGAGC ACCTCGCGGC GTGGGACGCC GAGCGCCGGG TCGACGTCGC CCTGACACGC CTGGGTGCGT GCCGGGACCT CGAGCGACCG CTCGCGACCC TCTCGGTCGG GGAGCGCTTC CGGGTGCGGC TCGCCTGCCG CCTCGCCGGC CGCGCCGACC TGCTCCTCCT CGACGAGCCG ACCAACCACC TCGACCGCGA CGGCATCGGC TTCCTCACCC GGGAGCTCAC CGCGTGGACC GGGGGAGTCG TCATCGTCAC GCACGACCGC CAGCTGCTCG ACGACGTCGC GACCGCCATC CTCGACCTCG ACCCGTCGAT CGACGGCAAG CCCGTGCTCT ACGGCCAGCC GGGGTACCTG TCGTACAGGT TCGCCAAGAA CCAGGCGCTG CACCGGTGGC GCCAGCGGTA CCGCGCCGAG CGCAAGCGGG CGATCCAGCT CGCGGAGCGC CTCGACCAGT CGTACGAGGG TCTCTCCGAC GAGTGGCGCC CGCCCAAGGG GTCGAACAAG AACCGCCGGG GGACGCGCGC CAGGATCCAC GTCAAGGCTG CCGACCGCCT CGTCGAGAAG CTCGAGGCCG AGGCCGTCGA GGTCCCGCCC CCGCCACCGA CGCTGCACTT CCCGGACCTG CCGTCCATGG AGCCGACCTG GGGAGCGGGG GACCCGGTCG TGGAGGTCCG GAACCCGCGG GTCGACGGCG GCGAGGGCCG TCCCGCCCGG CTCGACCTGC CCGGGCAGCG GGTCGTCGTG CCCGCCGCCG GGAGGCTGCT GGTCACCGGT GCCAACGGCG CCGGCAAGTC GACGCTGCTC GGCGCCCTGG CCGGGACGGT GCCCCTGGAC CGTGGCTACC GCACCGCGCT GTCGCGGTCC AGGATCGGCG TGGTCACCCA GGAGGGCGTC CGGCGCACGG GCACGCCGGC CGCCGACGGG CACGCCCCGA CCTGCTTCGA CGAGTACGCG GCGCTCGCCC TCGAGCTCCT CGCCTCGGGT GACCTCGACC CGAGCTACGT CGTCCCGGTC GCGATGCTCG GCGTCCTGTC GGAGGAGGAC CTCGACCGGC CCGTCGCCGA GCTCTCGGTC GGCCAGCGAC GACGCTTCGA CCTCGCGTGC GCGCTGCTCG CCGCCCCGCA CGTGCTGCTG CTCGACGAGC CGACCAACCA CCTGTCGATC GACCTCGTCG ACGACCTCAC CCAGGCGCTG CGCAGCACGT CGGCCGCCGT GGTCGTCGCG ACGCACGACC GTCGCATGCA GGACGACCTG CACGACTGGC CGCGCCTGGA CCTCTAG
|
Protein sequence | MHLVCDSLSF GYPGRPVLTD VSLRVSAHQR LAVVGENGSG KTTLLRLLAG EVPPAGGEVR RDGTLAVVSQ ELVVLDGQTV GDLVDEALAD VRRTAAELDR ASAEFDHEGA RLGELADILA RVEHLAAWDA ERRVDVALTR LGACRDLERP LATLSVGERF RVRLACRLAG RADLLLLDEP TNHLDRDGIG FLTRELTAWT GGVVIVTHDR QLLDDVATAI LDLDPSIDGK PVLYGQPGYL SYRFAKNQAL HRWRQRYRAE RKRAIQLAER LDQSYEGLSD EWRPPKGSNK NRRGTRARIH VKAADRLVEK LEAEAVEVPP PPPTLHFPDL PSMEPTWGAG DPVVEVRNPR VDGGEGRPAR LDLPGQRVVV PAAGRLLVTG ANGAGKSTLL GALAGTVPLD RGYRTALSRS RIGVVTQEGV RRTGTPAADG HAPTCFDEYA ALALELLASG DLDPSYVVPV AMLGVLSEED LDRPVAELSV GQRRRFDLAC ALLAAPHVLL LDEPTNHLSI DLVDDLTQAL RSTSAAVVVA THDRRMQDDL HDWPRLDL
|
| |