Gene Sked_24830 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_24830 
Symbol 
ID8634118 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp2772352 
End bp2772864 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content71% 
IMG OID 
ProductRNase HI 
Protein accessionYP_003315226 
Protein GI269795771 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.28769 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCAGC ACTCCCCCAC CACGACCGAG CCGAGCACCG AACCGAGCAC CGACCCCAGC 
ACCGAGGCGG ACTCGGCCGT CGAGATCTGG ACCGACGGAG CCTGCAAGGG CAACCCGGGC
GTCGGCGGGT GGGGCGCGTG GCTGCGCGCC GGCGGGCACG AGCGCGAGCT GTTCGGCGGC
GAGACCGTCA CGACCAACAA CCGCATGGAG CTCACCGCGG TCATCGAGGC GCTGCGCGCC
CTCAAGCGCC CGTGCGTGGT GAACCTGCAC GTCGACTCGA CCTACGTGAT GAACGGCATG
TCGAAGTGGA TCGCCGGCTG GAAGCGCAAC GGGTGGCGCA CGGGCGACAA GAAGCCCGTC
AAGAACGTCG ACCTCTGGCA GGCCCTCGAC GAGCAGGTCG CCCGGCACAC CATCACCTGG
ACCTGGGTCA AGGGCCACTC CGGCGACGTC GGCAACGAGA AGGCCGACGA GCTCGCCAAC
CGGGGCGTCG CCGAGGTGCG CGCCCGCGGC TGA
 
Protein sequence
MTQHSPTTTE PSTEPSTDPS TEADSAVEIW TDGACKGNPG VGGWGAWLRA GGHERELFGG 
ETVTTNNRME LTAVIEALRA LKRPCVVNLH VDSTYVMNGM SKWIAGWKRN GWRTGDKKPV
KNVDLWQALD EQVARHTITW TWVKGHSGDV GNEKADELAN RGVAEVRARG