| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_24740 |
|---|
| Symbol | |
|---|
| ID | 8634109 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | - |
|---|
| Start bp | 2759056 |
|---|
| End bp | 2760711 |
|---|
| Gene Length | 1656 bp |
|---|
| Protein Length | 551 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003315220 |
|---|
| Protein GI | 269795765 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.043803 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.105516 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCATCA GCAGCGGTCG TCAGTCCCAG GGGTCGGCAG GCCCGTCGCA GGGGACCACC
GGGGCGAGCG CCGACGCCGC CGAGCCGCAC GTCACCGTCT TCGACGTGGT GACCGACCTC
CGCCGCGACG TGGCGGCCGT CGAGCTGCCG CTCGCGATCG ACGGCGCCGA CGACGCAGCC
GGCCAGCGCT CGCGCCTCGT CGACCAGCTC GACGACCACC TCCTCCCGCG CCTCAAGGAG
CTCTCGAGCC CCGCGGTCGT CGTGATCGCC GGCTCGACCG GCGCCGGGAA GTCGACCCTG
CTCAACTCTC TCCTCCACGA GGAGGTCTCC GAGGCGTCGG TCATCCGCCC GACCACCCGC
GAGCCTGTCG TGGTCTACAA CCCGCAGGAC GCCGAGATCA TCGAGGGCAC ACCGCTCGTG
GCGACGGTCC GGTCGGTCGC CAACGTCAAC GTCCCGCGCG GCATCGCGCT GCTCGACGCC
CCCGACCTCG ACTCCGTGCT CGACGAGAAC CGCGAGACCG CGAGCCGGCT GCTCGAGGGC
GCCGACCTCT GGCTGTTCGT CACGACCGCG GCCCGCTACG GCGACGCGCT GCCCTGGCGC
ACCCTCGAGG GAGCGATGGA GCGTGGCGCG ACCGTCGCCA TGGTGCTCAA CCGCGCCCCG
AAGGCCTCGC TGACGACCGT GCGCGGTGAC CTGCTCAACC GGCTCCGCGA GCACCGCATG
GAGAGCGCCC CGCTGTTCGT GGTGCCCGAC GCCGGTCCCC ACGAGGGCCT CCTCGACGCG
TCGTCGGTCG CGCCCATCGA GCGCTGGCTG CGCACCCTCG GCGGGGCAGA CCGTGCCCGC
TCGGTCATCC TGCGGACGCT CCGCGGCTCT CTCGCGGCGC TCCCGCCCTG GGTCGACGAG
CTGAGCGAGC ACGTCGAGGC GCAGCACACC GCGGCCGTCC GCCTGCGGAT CGCCACCGAG
GCGGCGCTGC CGCAGGTCGC CCAGGCCACC CGCCTGGTGG TCGAGTCGGG GCGTCTGGCG
CTCGGCGCGG TCGAGACCCG CTGGTCACAG GTCTCCGAGC CCGCGCGGCT CGACAAGTCG
ATCTCGCGGT CCGGCGTGGC ACGCGGCTCC GCGCGGCGCG GACGGTCTCG AGAGGAGCAC
CTCCAGGGTC TGACCGACAC CGTCCGGGAG GCCGCGACCG CGATCCTCAC GGTGGCCACC
GACGACGCAC GCTCTGCTCT CCGGGACGCC CTCGAGGCAC TCCCGGGAGG ACGTGGGCTC
GTCCCCGAGG TCACCGAGGC GCAGGACGAC GCGGCGGCGC AGCAGGCCGT CGACGCGTGG
GTCGAGGCGG CCCGGGCCGA CATCGAGCGC GTCGACGTCG CCGTCGGCAA GCAGAACGCC
TCGGCGGTCC GTGCCTTCGG GCGCGACGGG CTCACGGCGG TCCTGCTGGC CTCGGCGGTC
GGGCTCGCGC CGGCCGAGGA CCTCCTGGGC CGGCTGCTCG GCAACGACGG GCGCGACCTC
AGCCCGGAGG TGACGAGCCG TCTCGCCGAC GCCGCCGAGG CTGCCGTCCT CGCGCAGGCG
CTGCCGGTCC TCGCCGCGCT CGACCACCCC GCCCTCGCCG ACGACGCAGC GATCGGGCTG
CGCGTCCGGC TCGCCGAGCT GGCCCAGCTG ACATGA
|
|---|
| Protein sequence | MSISSGRQSQ GSAGPSQGTT GASADAAEPH VTVFDVVTDL RRDVAAVELP LAIDGADDAA
GQRSRLVDQL DDHLLPRLKE LSSPAVVVIA GSTGAGKSTL LNSLLHEEVS EASVIRPTTR
EPVVVYNPQD AEIIEGTPLV ATVRSVANVN VPRGIALLDA PDLDSVLDEN RETASRLLEG
ADLWLFVTTA ARYGDALPWR TLEGAMERGA TVAMVLNRAP KASLTTVRGD LLNRLREHRM
ESAPLFVVPD AGPHEGLLDA SSVAPIERWL RTLGGADRAR SVILRTLRGS LAALPPWVDE
LSEHVEAQHT AAVRLRIATE AALPQVAQAT RLVVESGRLA LGAVETRWSQ VSEPARLDKS
ISRSGVARGS ARRGRSREEH LQGLTDTVRE AATAILTVAT DDARSALRDA LEALPGGRGL
VPEVTEAQDD AAAQQAVDAW VEAARADIER VDVAVGKQNA SAVRAFGRDG LTAVLLASAV
GLAPAEDLLG RLLGNDGRDL SPEVTSRLAD AAEAAVLAQA LPVLAALDHP ALADDAAIGL
RVRLAELAQL T
|
|---|
| |