Gene Sked_24450 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_24450 
Symbol 
ID8634080 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp2725973 
End bp2726326 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content74% 
IMG OID 
Producttranscriptional regulator, GntR family 
Protein accessionYP_003315191 
Protein GI269795736 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.498075 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCTTCC GCATCGACCC CTCCACCGGC GAGCCGCTGT TCGCGCAGCT CGCACGCCAG 
GTACGCCTCG GCGTCGCCCG CGGCGACCTC GCCGTCGGCG AGCGCCTGCC GAGCGCCCGC
GAGCTCGCTG CCTCGCTCGA CCTCAACGTC CACACCGTGC TCCGGGCCTA CCAGGACCTG
CGCGACGAGG GACTCGTCGA CCTCCGGCGC GGCCGAGGTG CGGTGATCAC CGAGCGCGCC
GGCGCGGACT TCGCCGCGCT CAGGACCGCC GTGGCCGCCG TCGCAGCCGA GTCGCGCGCG
CTCCACCTGT CCCCCGAGAC CACGCTCGCA CTGCTCAAGG AGGCACTCGC ATGA
 
Protein sequence
MLFRIDPSTG EPLFAQLARQ VRLGVARGDL AVGERLPSAR ELAASLDLNV HTVLRAYQDL 
RDEGLVDLRR GRGAVITERA GADFAALRTA VAAVAAESRA LHLSPETTLA LLKEALA