Gene Sked_24340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_24340 
Symbol 
ID8634069 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp2716169 
End bp2717365 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content71% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003315182 
Protein GI269795727 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.49719 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATCG ACTGGCTCAA GCCCCTTCTG ACCGCACCGG GACCGTTCGT CACCGTCTAC 
ATCGACGCGA CACGGACGAG CGAGGGCGAC CGCGAGGTCG AGAACAGGTG GAAGAGCGTC
CGCAGATCCC TCGAGAAGGA CGGCGCGGAC GGTGCCGTCC TCGACGTGAT CTCCGAGGAG
ATCGTGCGCC CGACCCGGGT CGGCGGTTCT CACGGCCGCG TCGTCATCGC CGACGAGACC
GGCATCCTGG TCGACCGGGT GACCAAGACG CCCCCGGCCG TCCAGAAGGG CACCTACGGC
CCGTTCCCGG CCCTCCTGCA GGCGGCGGGT GCCGCCGACG AGTCCGTGGA CTACCTGCGG
ATCGTCGTCG ACCGTCTCGG TGCGGACCTC ACGTGGTCCG AGGCGGGCGG TCACATGCCC
TACGCCGAGC ACGAGTCCGT CGAGGGCGGT CACGACGTCG TCAACAAGGT GAGCTCGGGC
GGGCTCTCGC ACAAGCGCAT CGAGGCGCGT GCCGAGGACT CCTGGGAGCG CAACGCCGAG
GCCGTCGCCG CGGAGGTCGA CCGCCAGGTC ACCGAGCACC GCCCAGAGGT GCTCCTCCTC
AGCGGCGACG TCCGTGCCGT CTCCTTGGTC AAGGGAGCCC TGCCCAAGAA GACCGCCGAG
CTCGTGGTCG ACGTGGCCGG CGGCTCACGT GGCCCCGGGG TGAACGAGGA GTCCTTCGAG
GCCAACATCC ACGAGGCGCT CGAGGCCTTC CGTGTCCAGC GCCGCACGAA GGTCCTCGAC
GAGTTCCGGC TGGAGCACGG CCGCAGCACG GGCGGCGTGA CCGGGCTCGC GGACGTCATC
GCGGTGCTGG CACGTGGTCA GGTCAAGGAG CTGCTGCTGT CGGACCGGTA CGGTCCCGAC
ACCGAGCTCG ACGGCCGGTC CGTCTGGGTC GGCGCCGAGC CGCTCCAGCT GGCAGGGTCC
GAGGCTGAGC TCACGTCCCT CGGCTCGATC ACCGACGAGC ACGAGCTGCC CGCCACGATC
GCGCTGGTCC GTGCGGCCCT CGGGCAGGAC GCCGGGCTCA CCTTCGTCCC GGACGACGAG
CTCTCGCTCG CCGACGGCGT CGGTGCGCTG CTGCGCTGGC ACGACAGCGG CACCCCGGGC
GACGAGCTGG CCCCCAGCAT GTCGTCCGAC GGCGGACGCA TCGAGAACCT GGGCTAG
 
Protein sequence
MKIDWLKPLL TAPGPFVTVY IDATRTSEGD REVENRWKSV RRSLEKDGAD GAVLDVISEE 
IVRPTRVGGS HGRVVIADET GILVDRVTKT PPAVQKGTYG PFPALLQAAG AADESVDYLR
IVVDRLGADL TWSEAGGHMP YAEHESVEGG HDVVNKVSSG GLSHKRIEAR AEDSWERNAE
AVAAEVDRQV TEHRPEVLLL SGDVRAVSLV KGALPKKTAE LVVDVAGGSR GPGVNEESFE
ANIHEALEAF RVQRRTKVLD EFRLEHGRST GGVTGLADVI AVLARGQVKE LLLSDRYGPD
TELDGRSVWV GAEPLQLAGS EAELTSLGSI TDEHELPATI ALVRAALGQD AGLTFVPDDE
LSLADGVGAL LRWHDSGTPG DELAPSMSSD GGRIENLG