Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_24280 |
Symbol | |
ID | 8634063 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | + |
Start bp | 2708341 |
End bp | 2711061 |
Gene Length | 2721 bp |
Protein Length | 906 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | valyl-tRNA synthetase |
Protein accession | YP_003315176 |
Protein GI | 269795721 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCTCAC CCGACTTCGC CGCACCTGCC CCCACCCCGC ACGACACCCG ACCCGTGGTC GCGACGGTCA AGCAGGTCCC GGAGAAGGTC AGCCTCGACG GCCTCGAGGG CCGCTGGGAC TCCGCGTGGG CTACCGACGG CACCTACTCC TTCGACCGCA GCGCCGAGCG CGCGGACGTC TACTCGATCG ACACCCCTCC CCCGACGGTG TCGGGCTCGC TGCACGTCGG CCACGTGTTC AGCTACACCC ACACCGACGT CGTCGCGCGC TTCCAGCGCA TGCGCGGCAA GTCCGTGTTC TACCCGATGG GCTGGGACGA CAACGGCCTG CCGACCGAGC GTCGTGTGCA GAACTACTAC GGCGTGCGCT GCGACACCTC GCTGCCGTAC GTCGAGGGCT ACGAGCCTCC GCTCCAGGGA GCCGAGGGCA AGAGCGTCAA GGCAGCCGAC CAGCAGCCCA TCAGCCGCAA GAACTTCATC GAGCTGTGCG AGCGCCTCAC CGCCGAGGAC GAGCAGCAGT TCGAGGCGCT GTGGCGCTAC CTCGGCCTGA GCGTCGACTG GGCGCACCAC TACCAGACCA TCGGGCAGCC GGCCCAGGCA GTTGCTCAAA CCGCTTTCCT GCGCAACCTC TCGCGCGGCG AGGCCTACCA GGCCGAGGCC CCCGGGCTGT GGGACGTGAC CTTCCAGACC GCTGTGGCCC AGGCCGAGCT CGAGGCCCGC GACTACCCCG GCCACTTCCA CAAGGTCGCC TTCCACGCGG CCGACGGCTC CGAGGTGGTC ATCGAGACCA CCCGCCCCGA GCTGCTCCCC GCCTGCGTCG CGCTCATCGC GCACCCGGAC GACGAGCGCT ACCAGCACCT CTTCGGCACC ACGGTCACCT CCCCGCTCTT CGGCGTCGAG GTCCCCGTCC TCGCGCACAC CCTCGCCGAG CGCGACAAGG GTGCCGGCAT CGCGATGTGC TGCACCTTCG GCGACCTCAC CGACGTCCAG TGGTGGCGCG AGCTCCAGCT GCCCACCCGC TCGGTGCTGG TCCGCGACGG CCGGATCACC CGCGAGCTCC CGGAGTGGAT CACCACCGAG CAGGGCACGG CGCTGTTCAC CGAGATGCTC GGCAAGACGA CCTTCTCGGC CCGCACCGTC GTCGTCGACG CGCTCCGCGA GTCGGGGGAC CTCAAGGGCG AGCCCGTCGC CACGCAGCGC AAGGCGAACT TCTTCGAGAA GGGCGACAAG CCCCTCGAGA TCGTCACCAG CCGCCAGTGG TACATCCGCA ACGGTGGCCG CGAGGCCCCG GGCCGCGACC TGCGCGCCGA GCTGCTCGCC CGCGGAGCCG AGCTGAACTT CCACCCCGAG TTCATGCAGG TCCGGTACGA GAACTGGGTC GGCGGCCTCA ACGGCGACTG GCTCGTCTCG CGCCAGCGCT TCTTCGGCGT GCCCATCCCC GTCTGGTACC CGGTCGACGA GCACGGCGAG CCGCAGTGGG ACGCGCCGAT CGTCCCCGAC GAGGCGATCC TGCCCATCGA CCCGTCTTCC GACGTGCCGG CCGGCTACAC CGCCGAGCAG CGTGGGCAGG CCGGCGGCTT CGTCGGCGAC CCCGACATCA TGGACACCTG GGCGACGTCG TCCCTCACCC CGCAGATCGC CGGCGGCTGG CTGAGCGACC CCGACCTCTT CTCCCGCGTG TTCCCGATGG ACCTGCGCCC CCAGGGCCAG GACATCATCC GCACCTGGCT CTTCTCGACC GTCGTCCGCT CGCACCTCGA GCACGGCTCG CTGCCCTGGT CCGACGCCGG CATCTCCGGC TGGATCCTCG ACCCGGACCG CAAGAAGATG AGCAAGTCCA AGGGCAACGT CGTCACGCCG ATGGGGCTGC TCGAGGAGCA CGGCTCGGAC GCCGTCCGCT ACTGGGCGGC CTCAGCGCGC CTGGGCACCG ACGCGGCCTT CGAGGTCGGC CAGATGAAGA TCGGCCGCCG CCTGGCCATC AAGGTCCTCA ACGCGAGCAA GTTCGCCCTG TCCTTCGCCG GGGACGACGA CCTCGTGCTC GACCCGGCCC TGGTCACCGA GCCGATCGAC CGCGCGATGC TCGCCGGCCT GGCCGACGTC GTCGACCGCG CGACCTCCGC GCTCGAGGGC TACGACCACA CCAAGGCGCT CGAGGTCTCC GAGACCTTCT TCTGGACCTT CTGCGACGAC TACCTCGAGC TCGTCAAGGA CCGCGCCTAC GGTGCCGGCG CCGAGGCTAC CGACGTGACC GCCGAGACGC TCTCCGCCCG GACCGGTCTC GCGATCGCCC TCGACACGCT CCTGCGGCTC TTCGCCCCCG TGCTCCCCTT CGCGACCGAA GAGGTGTGGT CGTGGTGGCG CGAGGGCTCG GTCCACCAGG CCGCGTGGCC GACCTCGGAC AGCCTGCGCG CCGCTGCTGA CGGCACGGAC CTCGCGGTGC TCACCGCGTC GGGCCACGCC CTCGCCACGC TGCGCAAGAT CAAGTCCGAG GCCAAGGTCT CCATGCGCAC GCCGATCCTG CTGGCCGAGC TCGCGGTGCC GCGCGCCTCG CTGCACGCCA TCGAGTCCGC GATGGTCGAC CTGCGCGGAG CAGGCCGGGT CACCGGCGAG CTCCGGCTCG ACATCGCCGC AGACGGCCAG GGCGACCCGG CCGTCCAGGG CGGCATCGTC GTCGTGCGCT CCGAGCTCGG CGAGGCCGAG GCCAAGAAGC CGCGCGGCTG A
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Protein sequence | MSSPDFAAPA PTPHDTRPVV ATVKQVPEKV SLDGLEGRWD SAWATDGTYS FDRSAERADV YSIDTPPPTV SGSLHVGHVF SYTHTDVVAR FQRMRGKSVF YPMGWDDNGL PTERRVQNYY GVRCDTSLPY VEGYEPPLQG AEGKSVKAAD QQPISRKNFI ELCERLTAED EQQFEALWRY LGLSVDWAHH YQTIGQPAQA VAQTAFLRNL SRGEAYQAEA PGLWDVTFQT AVAQAELEAR DYPGHFHKVA FHAADGSEVV IETTRPELLP ACVALIAHPD DERYQHLFGT TVTSPLFGVE VPVLAHTLAE RDKGAGIAMC CTFGDLTDVQ WWRELQLPTR SVLVRDGRIT RELPEWITTE QGTALFTEML GKTTFSARTV VVDALRESGD LKGEPVATQR KANFFEKGDK PLEIVTSRQW YIRNGGREAP GRDLRAELLA RGAELNFHPE FMQVRYENWV GGLNGDWLVS RQRFFGVPIP VWYPVDEHGE PQWDAPIVPD EAILPIDPSS DVPAGYTAEQ RGQAGGFVGD PDIMDTWATS SLTPQIAGGW LSDPDLFSRV FPMDLRPQGQ DIIRTWLFST VVRSHLEHGS LPWSDAGISG WILDPDRKKM SKSKGNVVTP MGLLEEHGSD AVRYWAASAR LGTDAAFEVG QMKIGRRLAI KVLNASKFAL SFAGDDDLVL DPALVTEPID RAMLAGLADV VDRATSALEG YDHTKALEVS ETFFWTFCDD YLELVKDRAY GAGAEATDVT AETLSARTGL AIALDTLLRL FAPVLPFATE EVWSWWREGS VHQAAWPTSD SLRAAADGTD LAVLTASGHA LATLRKIKSE AKVSMRTPIL LAELAVPRAS LHAIESAMVD LRGAGRVTGE LRLDIAADGQ GDPAVQGGIV VVRSELGEAE AKKPRG
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