Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_24240 |
Symbol | |
ID | 8634059 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | - |
Start bp | 2704148 |
End bp | 2705869 |
Gene Length | 1722 bp |
Protein Length | 573 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | ABC-type dipeptide transport system, periplasmic component |
Protein accession | YP_003315172 |
Protein GI | 269795717 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACGCCC CACGCACCAC CCGCTCCAGG CGACCCGCCC TGCTCAAGGC AGCGGCCACG ACCGCCGTCC TCGCCCTGAC CCTGACCGCG TGCAACGCGA ACAGCGGCAG CGACGACGAC GCGACGGCGC CGAGCACCCA GGGCTCGACC GGCGCGACCG AGAAGGGTGG CACCATGACC ATCCTCACGT CGGCCACCGA GATCAACTGG GACCCGGCCA AGAGCCAGAA CCTGGCCATC ACGACCCTCG GCCTCGTCGA GCGCCGCCTC ACCACCTGGG GTGTCGAGCC CGGCAAGCCC GGCGTCGTGG TCCCCGACCT CGCGACCGAC ACCGGGACCG TCTCCGACGA CGGCACCACG TGGACCTACA CCCTCAAGGA CGACATCTTC TTCGAGGACG GCACACCGAT CACCTCGGCG GACATCAAGT ACGGCGTCGA GCGGTCCTTC GCCCCCGAGC TCTCGGGCGG CCTCGGCTAC CACAAGAGCC TCCTCGAGGG TGGCGACGAG TACGCCGGCC CGTACACCGG GGGAGAGCTC GACTCGATCG AGACCCCGGA CGAGAAGACC ATCGTCTTCA AGCTCAAGAC GGCCTACGGC GACTGGCCGT GGATCGTCTC GCAGCCGGCC TTCGCGCCGG TCCCCGAGGC CCAGGACGAC GTCGCGACCT ACACCCAGCA GCCCGTTGCG TCCGGCCCCT ACAAGGTGGT CGACACCCAG CAGGGCGTGT CCGTGACGCT CGAGCGCAAC GACCAGTGGA CCGAGGAGAG CGACGACGTC CGCACCGCGG GCCCCGACTC GATCGTCTTC TCCCTCGGCC AGGACGCGAC CGTCACCGCG CAGCGCCTCA TCGCCGACGC GGGCGACGAC AAGAACGCCT TCGGCGCGAG CTTCGTGCCC CCGGCCCAGC TCGCGCAGGT CGCGAACAAC GCCTCCGCCA AGGAGCGCCT CGTGACCTCC GACGCCGGTG CGCTCGCCTA CCTGGCGATC AACACCGAGC GTGAGGGCCT CGACAACCTG CAGGTCCGTC AGGCCATCCA GTACGCGGTG GACAAGCAGG CCTTCCAGGT CGCGTCCGGC GGCGAGACCG GTGGTGCCAT CGCCACCACG CTCATCACCC CCGGCATCGA GGGCCGCGAG GACTACGATC TCTACGAGGC CGAGCCCGCG GGTGACGTCG ACAAGGCCAC CGAGCTCCTC ACGGAGTCCG GCTGGGACCC GACGAGCCGT GAGCTCGTGC TCCTCTCCGA GGACGACTCC GTGTCGCTCT CGCAGGCGCA GGCGATCGAG CAGGGTCTCG AGCGTGCCGG CTTCCAGGTG ACCATCAAGC CCGAGGCGCA GCTCGCCGCG GTCCAGACCC TCACCCAGGG CACCGGGGAG TACGACCTGA CGATCAGCTC CTGGCAGCCG GACTTCCCGA GCGCGAACGG CAACATCCAG CCGCTCTTCG ACTCCAGCCA GATCGGGAAC GGCGGCTACA ACATGGCCCG CTTCTCCGAC CCGGCCGTCG ACGAGCTCAT CGCGCAGGCC ACCGCCGAGA TCGACGTCGA GAAGGCCGGT GCCCTGTGGG CGCAGGCCGA CCGCGCCATC ATGGAGCAGT CGCCCGTCGT CCCGCTGATC TTCACGCGGA ACTCGTTCCT GCACGGCTCC AACGTGCAGA ACTTCTACAT CCCGGCCTTC CCGGCCTACC CGAACTACCT CAAGGCATCG CTGAGCCAGT GA
|
Protein sequence | MNAPRTTRSR RPALLKAAAT TAVLALTLTA CNANSGSDDD ATAPSTQGST GATEKGGTMT ILTSATEINW DPAKSQNLAI TTLGLVERRL TTWGVEPGKP GVVVPDLATD TGTVSDDGTT WTYTLKDDIF FEDGTPITSA DIKYGVERSF APELSGGLGY HKSLLEGGDE YAGPYTGGEL DSIETPDEKT IVFKLKTAYG DWPWIVSQPA FAPVPEAQDD VATYTQQPVA SGPYKVVDTQ QGVSVTLERN DQWTEESDDV RTAGPDSIVF SLGQDATVTA QRLIADAGDD KNAFGASFVP PAQLAQVANN ASAKERLVTS DAGALAYLAI NTEREGLDNL QVRQAIQYAV DKQAFQVASG GETGGAIATT LITPGIEGRE DYDLYEAEPA GDVDKATELL TESGWDPTSR ELVLLSEDDS VSLSQAQAIE QGLERAGFQV TIKPEAQLAA VQTLTQGTGE YDLTISSWQP DFPSANGNIQ PLFDSSQIGN GGYNMARFSD PAVDELIAQA TAEIDVEKAG ALWAQADRAI MEQSPVVPLI FTRNSFLHGS NVQNFYIPAF PAYPNYLKAS LSQ
|
| |