Gene Sked_24020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_24020 
Symbol 
ID8634037 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp2674167 
End bp2674751 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content71% 
IMG OID 
Productuncharacterized HhH-GPD family protein 
Protein accessionYP_003315150 
Protein GI269795695 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.355223 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCTCG ACCTGTGGCT CACCGGCGAC CCCGAGGCCG ACCGGCTCCT GTCTGACGAC 
CCGTTCGCGC TCCTGGTGGG GATGCTTCTC GACCAGCAGG TGACGATGGA GTCCGCCTTC
GCCGGGCCGC AGAAGCTCGC CGAGCGCATG GGCGGGCTCG ACGTCCGGAA GATCGCCGAG
GCCGACCCGG ACGAGTTCTC CGGGCTCTGC GCCACCAAGC CTGCGGTGCA CCGGTACCCC
GGGTCCATGG CCGGCCGGAT CCAGGCCGTC GCCCAGGAGG TCCAGGCGAC GTACGGCGGT
GACGTCACCC GGCTGTGGAC CGACGACGAC CCCGACGGCA CGACCGTGCT GCGCCGCCTC
AAGGACCTGC CGGGGTTCGG GGCGCAGAAG GCGTCGATCT TCCTCGCCCT CCTCGGCAAG
CAGTACGGCG TCCAGCCCGC AGGGTGGCGT GAGGCAGCGG GTTCCTACGG GGACGCCGAC
GCGCGACGCT CCATCGCGGA CGTCACCGAC GAGCAGAGCC TCGAGGAGGT GCGGACGACG
AAGAAGGCCG CGAAGGCCGC GGCCAAGGCG GCGAAGGCTA CGTAG
 
Protein sequence
MTLDLWLTGD PEADRLLSDD PFALLVGMLL DQQVTMESAF AGPQKLAERM GGLDVRKIAE 
ADPDEFSGLC ATKPAVHRYP GSMAGRIQAV AQEVQATYGG DVTRLWTDDD PDGTTVLRRL
KDLPGFGAQK ASIFLALLGK QYGVQPAGWR EAAGSYGDAD ARRSIADVTD EQSLEEVRTT
KKAAKAAAKA AKAT