Gene Sked_23960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_23960 
Symbol 
ID8634031 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp2667013 
End bp2668197 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content74% 
IMG OID 
ProductABC-type Fe3+-hydroxamate transport system, periplasmic component 
Protein accessionYP_003315144 
Protein GI269795689 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.220072 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.854026 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTGCCCG ACCGCACCAC CGCCCTGCCT GCCGCCGACG TCGCTGCTCT CCCGCCGACC 
CGGCTGAGGC ACGCCCGGAC CTCCGCCGCT CTCGCGCCCG TCGCGCTGGC CGCTGCCGTC
GTCCTGACGC TCGCCGGGTG CTCCGGCTCA GCACCGACGG GCGGTGCGTC GTCAGCGGGC
GCCGTGTCCG AGACGGCTGC CGGTGCTGCC GGCACCGAGG GCGCGACCAC CTACCCCGTC
ACCGTCGACA ACTGCGGGTT CGAGGTCACC TTCGGCTCCG CGCCGCAACG GGTCCTCACC
GTGAAGTCCT CGACGACCGA GATGCTCCTC GCGCTCGGGC TGTCGGACCG GGTCGTCGCG
ACGGCCTTCC CAGACGGCCC GGTGCCCGCG TGGCTGGCCG ACGCCGCTGC TGGTAACGAC
GCCGTCGCCA CCCCGCTCAC CATGCAGGCG CCCGGGCCCG AGGCCGTCAC CGAGGTCGAG
CCCGACCTCG TCTACGCAGG CTGGGAGTCG AACCTCACGG CAGAGAGCGC CGGTGACCGC
GGGACCCTCG CGACGCTCGG GGTGTCCAGC TACGTGTCAC CGTCGGCCTG CAAGGGCGAG
GCGTACATGC CGGACCCGCT GACCTTCGAC GATGTGTTCG CCGACATCAC CGAGGTCGGC
ACCGTCTTCG ACGTACCCGC GGCCGCGGAG GAGCTCGTCG CGCAGCAGCG CTCCGAGCTC
GACGCCGTCG TGCCCGACGA CCGCGGGCTC ACCGTGCTCT GGTACTCCTC CGGGACGGAC
ATCCCCTACG TCGGGGCGGG CATCGGCGCG CCGCAGATGA TCATGGATGC CGCCGGCCTC
ACGAACATCG CCGCCGACGT GCACGACACC TGGACCCCCT TCGGCTGGGA GGACGTCGTC
GCCGCCGACC CCGACGTGAT CGTGCTCGTC GACGCCGCGT GGAACACCGC CGACAGCAAG
ATCGAGATGC TCGAGGAGAA CGCCGCGACC GCGAACCTCA CGGCGGTCCG CGAGCAGCGC
TACGTCGTGG TCCCCTTCGC GGCGACCGAG GCGGGCGTCC GGAACGTGTC GGCCGTCGTC
GACCTCGTCG AGCGGCTCGG CGAGGTGGTG CCGGAGGCGG GCGCGGCGCC TGAGGCCGGC
GAGGCGCCTG AGGCCGGCTC CGCCGGCGCG ACCGCAGCAG GCTGA
 
Protein sequence
MLPDRTTALP AADVAALPPT RLRHARTSAA LAPVALAAAV VLTLAGCSGS APTGGASSAG 
AVSETAAGAA GTEGATTYPV TVDNCGFEVT FGSAPQRVLT VKSSTTEMLL ALGLSDRVVA
TAFPDGPVPA WLADAAAGND AVATPLTMQA PGPEAVTEVE PDLVYAGWES NLTAESAGDR
GTLATLGVSS YVSPSACKGE AYMPDPLTFD DVFADITEVG TVFDVPAAAE ELVAQQRSEL
DAVVPDDRGL TVLWYSSGTD IPYVGAGIGA PQMIMDAAGL TNIAADVHDT WTPFGWEDVV
AADPDVIVLV DAAWNTADSK IEMLEENAAT ANLTAVREQR YVVVPFAATE AGVRNVSAVV
DLVERLGEVV PEAGAAPEAG EAPEAGSAGA TAAG