Gene Sked_23920 details

Gene Information

• Locus tag: Sked_23920
• ID: 8634027
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sanguibacter keddieii DSM 10542
• Kingdom: Bacteria
• Replicon accession: NC_013521
• Strand: -
• Start bp: 2660814
• End bp: 2664182
• Gene Length: 3369 bp
• Protein Length: 1122 aa
• Translation table: 11
• GC content: 71%
• Product: Isoleucyl-tRNA synthetase
• Protein accession: YP_003315140
• Protein GI: 269795685

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.173224
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 22
• Fosmid unclonability p-value: 0.725229
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGTCGAGCC ACCCGGACAC CAACGGCACT GACGACGCAA CCACCACAGC GCCTCGTCCG 
TCGTCGTACC CGCAGCACCG CCCCGAGCAG TCGGGGGTGC CGGCGTCGCC GAACCTCCCC 
GCGCTCGAGG AGCAGGTCCT CGCGTACTGG AAGCAGGACG GCACCTTCCA GGCCTCGATC 
GACGCCCGGC CCGCCGGCGC CGACGGCGAC AACGAGTTCG TCTTCTACGA CGGCCCGCCC 
TTCGCCAACG GCCTGCCCCA CTACGGCCAC CTGCTCACCG GGTACGCCAA GGACGTCGTC 
CCGCGCTACC GCACCATGCG CGGCGAGCGG GTCGAGCGCC GCTTCGGCTG GGACACGCAC 
GGTCTGCCGG CCGAGCTCGA GGCGGAGCGG ATCCTCGGGA TCACCGACAA GAGCCAGATC 
GAGGCCATGG GCATCGACGT CTTCAACGAG GCGTGCCGCA CCTCGGTGAT GAAGTACTCG 
GAGGAGTGGA AGCAGTACGT CACGCGTCAG GCGCGCTGGG TCGACTTCGA CAAGGACTAC 
AAGACCCTCG ACGTCACCTT CATGGAGTCC GTCATCTGGG CCTTCAAGCA GCTGCACACC 
AAGGGCCTCG CCTACGAGGG CTACCGGGTG CTGCCCTACT GCTGGCGCGA CGAGACCCCG 
CTGTCCAACC ACGAGCTCCG CATGGACGAC GACGTCTACC AGTCGCGCCA GGACCCGGCG 
CTGACCGTCG CGCTGCGCCT GCTCGACGCC GATTGTGCGC CCACCGCGCA GCGCCTCGTC 
ATCTGGACCA CGACCCCCTG GACCCTCCCG TCCAACCTCG CCGTGGCTGT CGGACCGGAC 
GTCGACTACG TCGTGGTGCG TCCGGGCGAG GGCTCGGTCC TCGCGGGTGA CGAGGTGGTC 
CTCGGTGCTG CTCGCCTCGG CGCGTACGCC AAGGAGCTCG ACCTGGGCGA TGACCCGTCG 
GCCCACGTGC TCCGCACCGT CAAGGGCTCC GAGCTCGCCG GCACCCGCTA CGTCCCGGCC 
TTCGACCACT TCGCCGACGA CGCGGAGAAC CCGCACGCGC ACCAGATCCT CGCGGCCGAC 
TTCGTGACGG TCGACGACGG CACCGGCCTC GTGCACCTCG CCCCGGCCTT CGGCGAGGAC 
GACATGGCGG TCTGCCTCGA CGCGGGCATC CAGACCGTGG TGCCCGTCGA CGGGCGTGGC 
CGCTTCACCA CGCAGGTCCC CGAGTACGCG GGCCAGCAGG TGTTCGACGC GAACCCGCAC 
GTGATCAAGG ACCTCAAGGA CGGCACCGGG CCGCTCGCCC GCACCGACGC CGTCAGCCGC 
GCCGTCGTGC TGCGCCACGA GACGTACCAG CACTCCTACC CGCACTGCTG GCGCTGCCGG 
AACCCGCTGA TCTACAAGGC GGTCTCCAGC TGGTTCGTGC GCGTCACCGA GTTTCGCGAC 
CGCATGGTCG AGCTCAACCA GGACATCACC TGGACCCCGG ACCACATCCA GGACGGGCAG 
TTCGGCAAGT GGCTCGCGAA CGCCCGCGAC TGGTCGATCT CCCGTAACCG CTACTGGGGC 
ACGCCCATCC CCGTGTGGGT CTCGGACGAC CCCGCGTACC CGCGCACCGA CGTCTACGGC 
TCGCTCGCCG AGCTCGAGGC GGACTTCGGC GTGCCGGTCA CCGACCTGCA CCGCCCGTAC 
ATCGACGAGC TCACCCGGCC CAACCCGGAC GACCCGACGG GGGCGTCGAC GATGCGTCGC 
ATCCCCGACG TGCTCGACGT GTGGTTCGAC TCCGGCTCGA TGCCTTTCGC GCAGGTGCAC 
TACCCCTTCG AGAACACCGA GTGGTTCGAG CACCACTACC CGGGTGACTT CATCGTCGAG 
TACATCGGGC AGACGCGCGG CTGGTTCTAC ACGCTGCACG TCCTGGCGAC CGCGCTCTTC 
GACCGTCCGG CCTTCCGCAA CGCCGTCTCG CACGGCATCG TGCTGGGGTC CGACGGCCGC 
AAGATGAGCA AGTCGCTGCG CAACTACCCC GACGTCTCCG AGGTCCTCGA CCGCGACGGC 
TCGGACGCCA TGCGCTGGTT CCTCATGAGC TCGCCGATCC TGCGCGGCGG CAACCTCGTG 
GTCACCGAGG AGGGCATCCG CGACTCGGTC CGCCAGGTGC TGCTGCCGGT GTGGAGCACG 
TACTACTTCT TCACGCTGTA CGCGGGAGCC GCGGACGGCG GCGAGGGTCT CTCGGCACGC 
CGCGTCGAGC CCGACGAGGT CGCAGGCCTG GTCGACATGG ACCGCTACCT GCTCGCCCTC 
ACCGGCAACC TCGTCACCGA CGTCCAGGCC CAGCTCGACG CCTTCGACGT CTCGGGCGCC 
TGCGAGTCGG TGCGCCAGTA CCTCGACGTG CTCACCAACT GGTACGTCCG GACCCAGCGC 
GACAGGTTCT GGGGCGAGGA CGCCGACGCG TTCAACACCC TGTGGACCGC GCTCGAGACG 
CTCTCCCGCG TCATGGCGCC GCTGGCCCCG CTGCTCACCG AAGAGGTGTG GCGCGGGCTC 
ACCGGCGGAC GCTCGGTGCA CCTCACCGAC TGGCCGACGC TGGTCGACCC GTCGGGCGAG 
CGCACCGAGC ACGGTCAGGT GCTCGTCGCC GACGACGCGC TCGTCGCGTC GATGGACCGC 
GTCCGCTCGG TGGTCTCGCT GAGCCTCGGC CTGCGCAAGG CCAACCAGCT GCGGGTGCGC 
CAGCCCCTCG CGACCCTCAC CGTCGTGGTC GACGACCCCG CGGCCCTGGC CCCGTACCGC 
GAGCTGCTCG CCGGGGAGCT CAACGTCAAG GCCGTCGACC TGCGTCCGCT CGACGAGGGG 
GCGGCCGAGA GCTTCGGCAT CTCCCAGCGT CTCAACGTCA ACGCCCGCGC CGCCGGCCCT 
CGCCTCGGCA AGGGCGTCCA GGCGGCCATC AAGGCCGCCA AGTCCGGCGC GTGGCGCCTG 
GACGGCGACG AGGTGGTCGT CACGACGGCC GACGGCGACG TCCCGCTCGT CGCGGGCGAG 
TACGACCTCG TCACGGTCGT CGGCACCGAC TCCGACGCCC CGTCGACGGT CGCCGCAGCC 
GTGCTCCCGA CCGGCGGGTT CGTCGTCCTC GACCTCGCGC TCGACGACGC GCTCCTCGCC 
GAGGGCTACG CCCGCGACGT CGTCCGTGAC GTGCAGGACG CCCGCAAGGC CGCCGACCTC 
ACCGTCGGAG ACCGCATCCA CCTGACCCTC GAGGTGCCCG CGGACCGGCT CGACGCCGTC 
GCCGCGCACC GCGAGCTCAT CGCCAAGGAG ACGCTCGCGG TCGAGATCAC GGTCGAGACG 
TCGGCCGACG AGGAGCGCCG CGTCGCGGTC GCCCCAGCAG TGCCCTCGAC AGGAGACCAG 
CCCGCATGA 

 

Protein sequence

MSSHPDTNGT DDATTTAPRP SSYPQHRPEQ SGVPASPNLP ALEEQVLAYW KQDGTFQASI 
DARPAGADGD NEFVFYDGPP FANGLPHYGH LLTGYAKDVV PRYRTMRGER VERRFGWDTH 
GLPAELEAER ILGITDKSQI EAMGIDVFNE ACRTSVMKYS EEWKQYVTRQ ARWVDFDKDY 
KTLDVTFMES VIWAFKQLHT KGLAYEGYRV LPYCWRDETP LSNHELRMDD DVYQSRQDPA 
LTVALRLLDA DCAPTAQRLV IWTTTPWTLP SNLAVAVGPD VDYVVVRPGE GSVLAGDEVV 
LGAARLGAYA KELDLGDDPS AHVLRTVKGS ELAGTRYVPA FDHFADDAEN PHAHQILAAD 
FVTVDDGTGL VHLAPAFGED DMAVCLDAGI QTVVPVDGRG RFTTQVPEYA GQQVFDANPH 
VIKDLKDGTG PLARTDAVSR AVVLRHETYQ HSYPHCWRCR NPLIYKAVSS WFVRVTEFRD 
RMVELNQDIT WTPDHIQDGQ FGKWLANARD WSISRNRYWG TPIPVWVSDD PAYPRTDVYG 
SLAELEADFG VPVTDLHRPY IDELTRPNPD DPTGASTMRR IPDVLDVWFD SGSMPFAQVH 
YPFENTEWFE HHYPGDFIVE YIGQTRGWFY TLHVLATALF DRPAFRNAVS HGIVLGSDGR 
KMSKSLRNYP DVSEVLDRDG SDAMRWFLMS SPILRGGNLV VTEEGIRDSV RQVLLPVWST 
YYFFTLYAGA ADGGEGLSAR RVEPDEVAGL VDMDRYLLAL TGNLVTDVQA QLDAFDVSGA 
CESVRQYLDV LTNWYVRTQR DRFWGEDADA FNTLWTALET LSRVMAPLAP LLTEEVWRGL 
TGGRSVHLTD WPTLVDPSGE RTEHGQVLVA DDALVASMDR VRSVVSLSLG LRKANQLRVR 
QPLATLTVVV DDPAALAPYR ELLAGELNVK AVDLRPLDEG AAESFGISQR LNVNARAAGP 
RLGKGVQAAI KAAKSGAWRL DGDEVVVTTA DGDVPLVAGE YDLVTVVGTD SDAPSTVAAA 
VLPTGGFVVL DLALDDALLA EGYARDVVRD VQDARKAADL TVGDRIHLTL EVPADRLDAV 
AAHRELIAKE TLAVEITVET SADEERRVAV APAVPSTGDQ PA