| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_23630 |
|---|
| Symbol | |
|---|
| ID | 8633998 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | - |
|---|
| Start bp | 2630470 |
|---|
| End bp | 2631507 |
|---|
| Gene Length | 1038 bp |
|---|
| Protein Length | 345 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG |
|---|
| Protein accession | YP_003315111 |
|---|
| Protein GI | 269795656 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.251167 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.211786 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGCAT CGAGCCCCAC CCTGCTCGAC GAGAGCCACG TGACGGACCG GGTGACCCCG
GGCGAGCCCG CCCTCGGGAC CCCGGCCTCC GCCCTCGTGG CGACCCAGGA CCTCGTGGCG
ACCCCCGACG TCGACCTCCA GCCCGGTGCC CCGGTCGCAG CCCGCCCGGC CGCCCGGTCC
GGCATGCTGC ACGAGCGCCT CGACCGCGCC GCCCAGCGTG GGCCGGCTCC GACGGCCGTG
GTGGTCGACC AGGCAGCCGC CGCTGCGGCA GCGGTCGCGA GCGAGATCGC CGGCGTGTGG
CGCGAGTACA AGGCCTGCGC CGACGCACCC ACCCGCGAGC GCCTCATCCT GCACTACGCA
CCCCTCGTGA CCTCGGTCGC GTCCCGGGTC GGGATGAAGC TCCCCAGCAC CGTCGAGCAC
GCCGACCTCG TCTCGTACGG GATGTTCGGG CTCATCGACG CGATCGAGAA GTTCGAGCTC
GACCGCGAGA TCAAGTTCGA GACCTACGCC ACGTCACGCA TCCGGGGAGC GATCCTCGAC
GAGCTGCGCG CCAACGACTG GGTCCCGCGC TCGGTGCGCA GCAAGGCGCG CGCCGTCGAC
CGTGCGCACG CCGAGCTCGA GGCGCGCCTG CACCGGGCGC CGACCGACCC GGAGATCGCC
GAGCACATGG AGATCGCGCT GAGCGAGCTC CGCTCGATCC GCCACCTCGT GTCGACGGTG
AACCTCGTGG CGCTCGACGA GGTCTTCGGT GCGGGCGACC AGGTCGAGCC GGTCGGTCAC
CTCGACACCG GTCACGGCGC CCGCTCGACC GACCCGGCGC GGACCTTCGA GTCCAAGGAG
ACCAAGTTCC TGCTCTCGCA GGCCATGGAC CAGCTCGGAG AGCGCGAGAA GATCATGCTG
GTGCTCTACT ACTACGAGGG CATGACCCTC GCCGAGATCG GCGCCGTGCT CGGGGTCACC
GAGTCGCGGA TCTCGCAGAT GCACACTGCG GCCATGGGCC GGCTCCGTGA GAAGCTCTCC
CGCAGCGAGA GCGCCTGA
|
|---|
| Protein sequence | MTASSPTLLD ESHVTDRVTP GEPALGTPAS ALVATQDLVA TPDVDLQPGA PVAARPAARS
GMLHERLDRA AQRGPAPTAV VVDQAAAAAA AVASEIAGVW REYKACADAP TRERLILHYA
PLVTSVASRV GMKLPSTVEH ADLVSYGMFG LIDAIEKFEL DREIKFETYA TSRIRGAILD
ELRANDWVPR SVRSKARAVD RAHAELEARL HRAPTDPEIA EHMEIALSEL RSIRHLVSTV
NLVALDEVFG AGDQVEPVGH LDTGHGARST DPARTFESKE TKFLLSQAMD QLGEREKIML
VLYYYEGMTL AEIGAVLGVT ESRISQMHTA AMGRLREKLS RSESA
|
|---|
| |