Gene Sked_23490 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_23490 
Symbol 
ID8633984 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp2615348 
End bp2616532 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content76% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003315098 
Protein GI269795643 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0534331 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACCG CCGCGGATAT CCAGCCCCCG CCCGCCGTCG ACGCCGCCTC CGGGCACCCC 
CGCCCGGCAC CGCGGCGACG CCGCGCACGG ACGCTCCTGA CCGTGATCAT CAGCACAGTC
CTCGCCCTCG CCACCGTGGC CGGCTGCGGC ATCAGGCTCG AGAGCCCGGC GCCCGCCGCG
CTCGTCCCCG ACGCCGACGA GATCTCGCGG CAGGCGGCCG TCGCCGACGT CCTGCTCGTG
GGGCCGGAGG CCCGCCTGAC GATCCCGACC GTCGACCCCG CCTCCCCCGT GGTCGCGCTG
CTCGAGGAGA TCGACGCGAG CGCGACCGCG CAGGCCGAGG CCCTCGGCGG GGAGTACGTC
TCGGGCGTCG AGGGTGAGGG CGGCGACCCG GCCGGCACCA GCTCGCACGA CGCCGCAGAC
GGTCAGACCG CCCTGGCGCC CGGCTCGGTC ACCGACGACG AGGGCACCAT CGACCCGTCG
GTCGCGGCGA GCCCGACCGA CGAGCCCACC GGCTCGACGA CGACCGACCC GGCACCGTCG
GTCCCCCGCC TGCTCACCGT CCTCACGCAG TCCGCCGACC GCACCCGGGC CTCGATCGGT
ACTCCGCGCG ACCCCGCGCT CGCCCGCCTC TACGCCTCGG TCGCGACCTC GCACCTCGAC
CAGGCACGCT CGCTCGCGGC CCTCTCCGGC CTCGACGCCC CGGCACCCGA GTCCTTCACG
ACCACGCTCC CGACCACGCT GCCCAAGAAC CTCTCCGCAG CCGACCTCGT CACGGTCGTG
CGGGCCGAGG ACGCCGCGGG CTACGCCTAC GAGGTCATGG CCGCCCGCCT GGCCGACGGT
GACCGGACGG CGGCCCGCGA CCGCGCCGCA GAGCACCGTG AGCGGGCCCA GGGCTGGGCA
GTGCTCGCCT CGCTCGACGG AGCGGCCACC GACCCGAGGG AGGTGGCCTA CGACCTCGGC
ACGATCGCCG ATGGGACCCC GACGCTCGCC TCGCGCGACT CGATGGTCAC GCGCGCCGCG
GAGATCGAGG CCGACCTCGC GGACGCCTAC GCGACCTTCG TCGGCCAGGT CGACGCCGAC
GCCCGGTCCT CGATGCTCGA CCTCCTGGCG GACGCACACC TCTCCTCGAG GTCCTGGGGA
GCACCCGCGA GCACCTTCCC CGGCATGCCC GAGCTCGCCG GCTGA
 
Protein sequence
MNTAADIQPP PAVDAASGHP RPAPRRRRAR TLLTVIISTV LALATVAGCG IRLESPAPAA 
LVPDADEISR QAAVADVLLV GPEARLTIPT VDPASPVVAL LEEIDASATA QAEALGGEYV
SGVEGEGGDP AGTSSHDAAD GQTALAPGSV TDDEGTIDPS VAASPTDEPT GSTTTDPAPS
VPRLLTVLTQ SADRTRASIG TPRDPALARL YASVATSHLD QARSLAALSG LDAPAPESFT
TTLPTTLPKN LSAADLVTVV RAEDAAGYAY EVMAARLADG DRTAARDRAA EHRERAQGWA
VLASLDGAAT DPREVAYDLG TIADGTPTLA SRDSMVTRAA EIEADLADAY ATFVGQVDAD
ARSSMLDLLA DAHLSSRSWG APASTFPGMP ELAG