| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_23430 |
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| Symbol | |
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| ID | 8633978 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sanguibacter keddieii DSM 10542 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013521 |
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| Strand | - |
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| Start bp | 2608477 |
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| End bp | 2609508 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | |
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| Product | tRNA pseudouridine synthase B |
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| Protein accession | YP_003315092 |
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| Protein GI | 269795637 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.902891 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.190308 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCACG AGACACCGAC CACCGGCCCC CGTGCGCGGG CAGACCGTCC GGTCCGCCCG
CGCAGGCCCA CCGCGCCTGA CGGGCTCGTG CTCGTCGACA AGCCGGCGGG CTGGACGAGC
CACGACGTCG TCGCGCGGAC CCGCGGACTG GCCGGGACCC GCAAGGTCGG CCACGCCGGG
ACCCTCGACC CGATGGCGAC CGGGGTGCTG GTCCTCGGTG TCGGGCGCGC GACGCGGCTG
CTGACGTACG TGGTCGGCAC CGACAAGGAG TACACCGCGA CGATCCGCCT CGGGCAGGCG
ACCACCACGG ACGACGCCGA GGGCGAGATG CTGACCACCC CCGGTGCCGC GGGAGTCGCT
GCCGACGCCG TCGCCGCAGG GATCGCCCGC CTCACCGGTG AGATCCAGCA GGTCCCGAGC
TCGGTGAGCG CCATCAAGGT GGACGGCAAG CGCGCCTACG CGCTCGTCCG GTCGGGCGCC
GACGTGGCCC TCGACGCCCG CACGGTGACG ATCAGCCGCT TCGACGTGCA CGCGGTGCGT
GAGGTCGAGG TGACGGTCGA GGGCGACAGC GAGGCCGGGA CGGCCACCAC CACGACCACC
GTGCTCGACG TCGACGTGAC CGTGGTCTGC TCGTCGGGCA CCTACATCCG TGCCCTGGCG
CGTGACCTCG GGGCAGACCT GGGCGTCGGG GGCCACCTCA CCGCGCTGCG CCGGACGCGC
GTCGGCGGGT ACACGCTCGA CGCGGCCAGG TCGTTCGAGG AGCTGGAGTC CCAGGCCGAC
GCCGACGGCA CGCTGGCGAC CCTCCCGCTG GCCGACGCGG CCCGGGGGAC CTTCCCGGTG
CGGGTGCTCA CGGCCGAGGA GGTCGTCGCG CTCTCGTACG GGCAGTGGCT CGAGCCGACC
GGCGCCTCCG GGACGACCGC GGCGCTCTCG CCCGAGGACG AGCTCGTCGC CCTCGTCGAG
GACGTCACGC GCAGCGGCCA CGTCAAGGCG AAGCCGGTCA TCGTCTTCGC GCCGTCCCAG
GCGTCCACCT AG
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| Protein sequence | MTHETPTTGP RARADRPVRP RRPTAPDGLV LVDKPAGWTS HDVVARTRGL AGTRKVGHAG
TLDPMATGVL VLGVGRATRL LTYVVGTDKE YTATIRLGQA TTTDDAEGEM LTTPGAAGVA
ADAVAAGIAR LTGEIQQVPS SVSAIKVDGK RAYALVRSGA DVALDARTVT ISRFDVHAVR
EVEVTVEGDS EAGTATTTTT VLDVDVTVVC SSGTYIRALA RDLGADLGVG GHLTALRRTR
VGGYTLDAAR SFEELESQAD ADGTLATLPL ADAARGTFPV RVLTAEEVVA LSYGQWLEPT
GASGTTAALS PEDELVALVE DVTRSGHVKA KPVIVFAPSQ AST
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