Gene Sked_23280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_23280 
Symbol 
ID8633963 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp2593215 
End bp2594363 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content73% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003315077 
Protein GI269795622 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.595186 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0736957 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCAC GCTTCAACCC CCCTCCCGGC TGGCCTCCCG CTCCGGCCGG GTGGACACCA 
CCTCCCGGGT GGAGCCCGGA CCCCTCGTGG CCGGCCCCGC CCGCGGGCTG GCAGCTCTGG
GTCGAGGACG CTCCCGGCGC GCCGCAGGGC GACGACGTCT CCAGGTTCTC CAAGCCTGAC
CCCTCGTCGG CGCCGACCAC GGCGATGCCG ACCTACCAGG CACCCGGCGC GCCGGGTGCG
CCGAACCACG GCGCGGTGCC GCCGAGCGGT CCCGTCCCGA CCGGACCCGG TGCGGCGTGG
TCGGGCTCGC CCGAGGCGCC GTCCTGGCAG CAGCAGGGGT CGCAGGGACC CGGCGGGCCC
GGTGGCCCGA ACGGCTTCGG CGGTCCGGGT GGCCCCGGTG GCCAGCAGCC CGGCCGGGCT
GCAGGCCGGC AGTGGCTCAT CCCCGTGATC ATCGCCCTCG TCGCGATCGG CGCGATCATC
GCCGTGCTCT TCGCGACCGG GGTGCTCGGA GGCTCGGACG AGCCTGACGC GTCGCCCACC
AGCTCCGCAC CGACGTCGGC CAGCCCTGAG CCGACGGACG AGGCGACCGA GGAGCCGACG
GACGACCCGA CCACGGACGA CGCCACGGAC GAGCCGACGG TCGCCCCGAG CGACGACGCG
TCGGACGAGC CGACCGACGA GGCCACCGGC TCCGTCTCCG GCGACGGCGG CTCGCGCACC
TCGCCGCTCG CACCGGGCGA GACCGCGCCG CTGGGCGACT GGACGGTCTC CTTCGCAGCG
ACGAACTCCG ATGCCTGGGC CGAGATCTCC GAGTCGAGCA GCAGCGTGTC GAGCTTCTAC
GAGCCCGCCG ACGGCGACAG CTACCTCATG TCGCCGCTGA CCATCACCTA CCTCGGTGAG
GGCAGCGAGC CGCTGTACAT GCTCGACTAC GTCTTCGTGT CGTCGGACGG CGTCACGTAC
AAAGACAAGT GCGGCTACGT GCCGCTGCCC AACCAGCTCG AGACCGGCCA GGAGCTCTAC
ACCGACGCGA CCGTGACCGG GAACGTCTGC GTCACCGTCC CGACCGACAA GATCGACGGC
GGCGTGTGGC GCATCAGCGG CTGGGACCGG GTCAACAAGG ACACCGAGGC GTTCTTCGCC
CTCAGCTGA
 
Protein sequence
MTARFNPPPG WPPAPAGWTP PPGWSPDPSW PAPPAGWQLW VEDAPGAPQG DDVSRFSKPD 
PSSAPTTAMP TYQAPGAPGA PNHGAVPPSG PVPTGPGAAW SGSPEAPSWQ QQGSQGPGGP
GGPNGFGGPG GPGGQQPGRA AGRQWLIPVI IALVAIGAII AVLFATGVLG GSDEPDASPT
SSAPTSASPE PTDEATEEPT DDPTTDDATD EPTVAPSDDA SDEPTDEATG SVSGDGGSRT
SPLAPGETAP LGDWTVSFAA TNSDAWAEIS ESSSSVSSFY EPADGDSYLM SPLTITYLGE
GSEPLYMLDY VFVSSDGVTY KDKCGYVPLP NQLETGQELY TDATVTGNVC VTVPTDKIDG
GVWRISGWDR VNKDTEAFFA LS