Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_23230 |
Symbol | |
ID | 8633958 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | + |
Start bp | 2587433 |
End bp | 2588215 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | |
Product | formamidopyrimidine-DNA glycosylase |
Protein accession | YP_003315072 |
Protein GI | 269795617 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.434917 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.041924 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCTGAGG GCGACACCGT CTTCCTCACC GCGCGCCGGC TCGACGAGGC GCTCAGCGGG ACGGTGCTCA CGTGGGCCGA GCTCCGCTGG CCGAACCTCG ACCCGACGGC GCTCGCCGGG ACGACGGTGC TGCGCTCGCG CGCCTACGGC AAGCACGTCC TCACGACGGT GGACAGCGGG TGGACGCTGC ACACGCACCT GCGCATGGAC GGGACGTGGC GGGTGCACCG TACCGACCCC GCAGCCCGGC TCGCCCGGCG CCCGACCGTC CGTGCCGTGC TGGCCAACGA GACGTGGACC TGCGTCGGCG ACAGGCTCGG GATGATGGAC CTGGTCCGGA CCCGTGACGA GCACACCCTG CTCGACCACC TGGGCCCGGA CATCCTCGCA CCGGACTTCG GCAGCTCCCC GGACGGGCTC GCAGCCGTCC TGCGGACCTA CCAGGCGCAG GGTGCTCGGC CGGTCGGCGA CTGCCTGCTC GACCAGACGC TCATGGCCGG TGTGGGGACC CTGTTCGCGG CGGAGGGACT GTTCGACCGC CAGGTGTGGC CCTGGACCCC GGCGGCCGAG GTCGACCTGG TCCCGCTGCT GGGCAGCATC CGACGGAACC TGCTGCGCGG CGTCGCCCGT CCGGTCGACG GCCGGGTGGT GCACGTCCAC TCCCGGTCGG GCTCTCCGTG CCACCGCTGC GGGACCACCA TCGTCCGTGG TCTGGCCGGG GTCGCCCCGA TGGAGCGGCC GATGTTCTAC TGCCCCGTCT GCCAGCCCGA ACCGCCTCGG TGA
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Protein sequence | MPEGDTVFLT ARRLDEALSG TVLTWAELRW PNLDPTALAG TTVLRSRAYG KHVLTTVDSG WTLHTHLRMD GTWRVHRTDP AARLARRPTV RAVLANETWT CVGDRLGMMD LVRTRDEHTL LDHLGPDILA PDFGSSPDGL AAVLRTYQAQ GARPVGDCLL DQTLMAGVGT LFAAEGLFDR QVWPWTPAAE VDLVPLLGSI RRNLLRGVAR PVDGRVVHVH SRSGSPCHRC GTTIVRGLAG VAPMERPMFY CPVCQPEPPR
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