Gene Sked_23230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_23230 
Symbol 
ID8633958 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp2587433 
End bp2588215 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content74% 
IMG OID 
Productformamidopyrimidine-DNA glycosylase 
Protein accessionYP_003315072 
Protein GI269795617 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.434917 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.041924 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCTGAGG GCGACACCGT CTTCCTCACC GCGCGCCGGC TCGACGAGGC GCTCAGCGGG 
ACGGTGCTCA CGTGGGCCGA GCTCCGCTGG CCGAACCTCG ACCCGACGGC GCTCGCCGGG
ACGACGGTGC TGCGCTCGCG CGCCTACGGC AAGCACGTCC TCACGACGGT GGACAGCGGG
TGGACGCTGC ACACGCACCT GCGCATGGAC GGGACGTGGC GGGTGCACCG TACCGACCCC
GCAGCCCGGC TCGCCCGGCG CCCGACCGTC CGTGCCGTGC TGGCCAACGA GACGTGGACC
TGCGTCGGCG ACAGGCTCGG GATGATGGAC CTGGTCCGGA CCCGTGACGA GCACACCCTG
CTCGACCACC TGGGCCCGGA CATCCTCGCA CCGGACTTCG GCAGCTCCCC GGACGGGCTC
GCAGCCGTCC TGCGGACCTA CCAGGCGCAG GGTGCTCGGC CGGTCGGCGA CTGCCTGCTC
GACCAGACGC TCATGGCCGG TGTGGGGACC CTGTTCGCGG CGGAGGGACT GTTCGACCGC
CAGGTGTGGC CCTGGACCCC GGCGGCCGAG GTCGACCTGG TCCCGCTGCT GGGCAGCATC
CGACGGAACC TGCTGCGCGG CGTCGCCCGT CCGGTCGACG GCCGGGTGGT GCACGTCCAC
TCCCGGTCGG GCTCTCCGTG CCACCGCTGC GGGACCACCA TCGTCCGTGG TCTGGCCGGG
GTCGCCCCGA TGGAGCGGCC GATGTTCTAC TGCCCCGTCT GCCAGCCCGA ACCGCCTCGG
TGA
 
Protein sequence
MPEGDTVFLT ARRLDEALSG TVLTWAELRW PNLDPTALAG TTVLRSRAYG KHVLTTVDSG 
WTLHTHLRMD GTWRVHRTDP AARLARRPTV RAVLANETWT CVGDRLGMMD LVRTRDEHTL
LDHLGPDILA PDFGSSPDGL AAVLRTYQAQ GARPVGDCLL DQTLMAGVGT LFAAEGLFDR
QVWPWTPAAE VDLVPLLGSI RRNLLRGVAR PVDGRVVHVH SRSGSPCHRC GTTIVRGLAG
VAPMERPMFY CPVCQPEPPR