| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_23090 |
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| Symbol | |
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| ID | 8633944 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sanguibacter keddieii DSM 10542 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013521 |
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| Strand | - |
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| Start bp | 2568349 |
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| End bp | 2569290 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | |
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| Product | diaminopimelate epimerase |
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| Protein accession | YP_003315058 |
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| Protein GI | 269795603 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.107849 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTCAG GAACCGTCCC CACGACACCG CTGCCCTTCG CCAAGGGGCA CGGCACCGAG
AACGACTTCG TGCTCCTCGA CGACCGTGAG GCACGGCTCG ACCTCACCCC CGAGCTCGTC
CGGGCGCTCG CGGACCGTCG CGCCGGCGTC GGCGGCGACG GCGTGATCCG CGTGGTCCCG
TCGTCCGCCC TCGCCGAGGG GCGCGCCGTG CTCGCGCACG AGCCCGCGGC GCACTGGTTC
ATGGACTACC GCAACGCCGA CGGCTCCGTC GCCCAGATGT GCGGCAACGG TGTCCGCGTC
TTCGCCGCCT ACCTCGAAGA GCTCGGGCTC GCGACCTTCG CCGACGGCCG CGAGCTCGTG
CTAGGCACCC GCGCCGGAGC GCGGCGCGTC CGCAAGGAGG ACAGCGGCTG GTACGCGGTC
GACATGGGGG TCTGGTCCTT CCCCGGAGGT GACGCGGCTG TCCGCGACGG CTTCGACGCC
GAGGTGACCG TGAGCGGGCT CGAGCCGGCC GGCACGCAGG TCCCACGCCC CGCGCTCAGC
GTCGACCTCG GCAACCCGCA CACCGTCGTG GCCCTCGCGA GCCTCGACGA CCTCGACCGC
GCCGACCTCC ACACCGCTCC CGACGTGCTC CCGCTGCCCG CCGAGGGCAC CAACGTCGAG
CTCGTGGTGC CGCTCGGCGA GGAGACCAGC GTCGACGGCA CGGTCGTGGG TCGTGTCCGC
ATGCGCGTCC ACGAGCGGGG GGTGGGGGAG ACCCGCTCCT GCGGCACCGG CGCGTGCGCG
GCAGCGCTCG CGGTCCGTGC CTGGGCCGGG GCCGGCGCAC CGGACGTGTG GCTCGTCGAC
GTGCCCGGCG GCACCGTCCG GGTCACGCTG CTCGAGGACG GCCACGTCGA GCTCGCCGGT
CCCGCCGTCC TCGTCGCGGA CGGAGCCGTC CGCCGGGACT GA
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| Protein sequence | MTSGTVPTTP LPFAKGHGTE NDFVLLDDRE ARLDLTPELV RALADRRAGV GGDGVIRVVP
SSALAEGRAV LAHEPAAHWF MDYRNADGSV AQMCGNGVRV FAAYLEELGL ATFADGRELV
LGTRAGARRV RKEDSGWYAV DMGVWSFPGG DAAVRDGFDA EVTVSGLEPA GTQVPRPALS
VDLGNPHTVV ALASLDDLDR ADLHTAPDVL PLPAEGTNVE LVVPLGEETS VDGTVVGRVR
MRVHERGVGE TRSCGTGACA AALAVRAWAG AGAPDVWLVD VPGGTVRVTL LEDGHVELAG
PAVLVADGAV RRD
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