Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_23040 |
Symbol | |
ID | 8633939 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | + |
Start bp | 2561878 |
End bp | 2562654 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | |
Product | SOS-response transcriptional repressor, LexA |
Protein accession | YP_003315053 |
Protein GI | 269795598 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.620289 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.0692962 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAGACGC AGGACAGCAC ACCGTCAGGA GCTGCCGGGG GCGCGCCCGC GGCCGAGGCC GTCACCGTGA TCGGCGCGGC CGACGGCCTG ACCCCGCGTC AGCGCGGGGT GCTGGAGACC ATCCGGGAGT CCGTCGACAC CCGCGGCTAC GCGCCGAGCA TGCGGGAGAT CGGCGAGGCT GTCGGCCTCA CGAGCCCGTC GAGCGTCAAG CACCAGCTGA CGACCCTCGA GCGCAAGGGC TACCTCCGCC GCGACCCCAA CCGACCGCGA GCCATGGAGC TCGTCGTGCC GGGCCCGGCG CAGGGAGCGC CGACCGGCGA GCTGACGTCA CGTCCCGCCG GCCGCGCCCT GCGCTCGGTC TCCACCCAGC AGACGGCGGA CGTCGACCTG GACAGCCACC CGACCCCGTC GTTCGTCCCC GTCGTGGGCC GCATCGCCGC CGGTGGACCG ATCCTCGCGG AGCAGGTCGT CGAGGACGTG TTCCCGCTGC CCCGCCAGCT CGTCGGCGAC GGCGAGCTGT TCCTCCTCCG GGTGACCGGT GAGTCGATGG TCGACGCGGC GATCTGCGAC GGCGACTGGG TGGTCGTGCG CCGTCAGCCC GTGGCCGAGA ACGGTGAGAT CGTCGCAGCG ATGATCGACG GCGAGGCGAC CGTGAAGACC TTCAAGCGCG TCGACGGGCA CGTCTGGCTC ATGCCCCACA ACGACGCGTT CTCGCCCATC CTCGGTGACG AGGCGACCAT CCTCGGCCGG ATCGTCACTG TGCTCCGCAG CCTCTGA
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Protein sequence | MKTQDSTPSG AAGGAPAAEA VTVIGAADGL TPRQRGVLET IRESVDTRGY APSMREIGEA VGLTSPSSVK HQLTTLERKG YLRRDPNRPR AMELVVPGPA QGAPTGELTS RPAGRALRSV STQQTADVDL DSHPTPSFVP VVGRIAAGGP ILAEQVVEDV FPLPRQLVGD GELFLLRVTG ESMVDAAICD GDWVVVRRQP VAENGEIVAA MIDGEATVKT FKRVDGHVWL MPHNDAFSPI LGDEATILGR IVTVLRSL
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