Gene Sked_23020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_23020 
Symbol 
ID8633937 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp2560068 
End bp2560559 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content71% 
IMG OID 
Producttranscriptional regulator NrdR 
Protein accessionYP_003315051 
Protein GI269795596 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.19394 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCACTGCC CGTTCTGCCG CCACGCCGAC TCGCGCGTGG TCGACTCGCG CACCTCGGAC 
GACGGCGCGT CGATCCGACG GCGTCGGCAG TGCCCCGCCT GCACCCGTCG GTTCACCACC
CTCGAGACCG CGAGCCTCTC GGTCGTCAAG CGCTCGGGCG TCACCGAGCC CTTCAGCCGC
GAGAAGGTCG TCAACGGGGT GCGCAAGGCC TGCCAGGGTC GACCCGTCAC CGAGGACGAC
CTCGCCCTCC TGGCCCAGCG CGTCGAGGAG AGCGTGCGGG CGACCGGCAT CGCCGAGCTC
GACGCCTACG AGATCGGCCT GACGATCCTC GGCCCGCTCC GCGAGCTCGA CGAGGTCGCG
TACCTGCGGT TCGCCTCGGT CTACCAGGCC TTCGACTCTC TCGAGGACTT CGAGGCAGCC
ATCAACCTGC TGCGCGCCGA GCACGAGCAG GCAGCCGCCG ACGAGAGCTC AGTCGACCGG
TCGACCGACT GA
 
Protein sequence
MHCPFCRHAD SRVVDSRTSD DGASIRRRRQ CPACTRRFTT LETASLSVVK RSGVTEPFSR 
EKVVNGVRKA CQGRPVTEDD LALLAQRVEE SVRATGIAEL DAYEIGLTIL GPLRELDEVA
YLRFASVYQA FDSLEDFEAA INLLRAEHEQ AAADESSVDR STD