Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_22840 |
Symbol | |
ID | 8633919 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | - |
Start bp | 2538958 |
End bp | 2540352 |
Gene Length | 1395 bp |
Protein Length | 464 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | |
Product | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase |
Protein accession | YP_003315033 |
Protein GI | 269795578 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0300768 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATCGATC TGACTGCCGC CGAGGTCGCG GACCTCACGG GAGGCACGCT CGCCGCCCCA CACACGACGC GGGTCCACGG CCCGACCGTG GTCGACTCCC GCAAGGTCTC GGCCGGGGCG CTCTTCGTGG CGCTCGTCGG CGAGTCCTCC GACGGCCACG ACCACGCTGC GGGTGCGGTC GCCGACGGCG CGGCGCTCGT GCTCGCGAGC CGCGAGCTCG ACGGGCTGCC GTGCGTCGTG GTCGACGACG TCACCCGGGC GCTCGGGCTG GTCGCCGCCG AGCACCTCCG TCGTCTCCGG GCCTCCGGCC CGCTCCAGGT CGCCGCGGTG ACCGGCTCGG TCGGCAAGAC GACCACCAAG GACCTCCTCG GGCACGTGCT CTCCGAGAGC GGACCCACGG TCATGCCTCG CGCCTCCTTC AACAACGAGA TCGGCCTGCC GCTCACCGTC CTCGAGGCAG GCCCCGAGAC CCGCTACCTC GTCCTCGAGA TGGGTGCCTC GGCACCCGGC GACCTCACCT ACCTCACCGG TATCGCCCCA CCCGACGTCT CGATCGTCCT GGCCGTCGGT GCGGCTCACC TCGGCGGCTT CGGCGGGCTC GACGGCGTCG CCCGGGCCAA GTCCGAGATC GTCACCGGTC TGCGCCCCGA GGGCGTCGCC GTGCTCAACG CGGACGACCA CCGGGTCGTC GCCATGCGCG ACCTCGCACC CTCGCGCGTC GTCACCTTCG GGACCGTGCG CGACGCCGGC GTGCGGGCGC ACCGCGTCTC GGTCGACCGT CTCGGTCGTG TCTCCTGCCA GGTGGTCGTG GGGGAGCGCA CCGCAGACCT CTCGCTCCGC CTCGTGGGCG AGCACCACCT CACCAACGCG CTCGCCGCGC TCACCGCGGC GGTCGAGCTG GGCGTCGACC TCGACACCGC CGCCGCGCTC GTCAGCTCCG TGGACGCCGC CAGCCCGCAC CGGATGGCCG TCACCGAGCG GCCTGACGGC GTGACCGTCA TCGACGACTC CTACAACGCG AACCCCGACT CGATGCGCGC GGCCCTCAAG GCCCTCGCCG TCGTCGCGGG CCGGGACCGC CGCTCGGTCG CCGTCCTCGG CGAGATGCTC GAGCTCGGGC CCGACTCGCG CGACCAGCAC GACGAGATCG GACGCCTCGT GGTCCGCCTC AACATCAAGC TCCTCGTGGT GGTCGGCGCC GGGGCCTCCG GCCTCGCCGA CGGCGCCACC CAGGAGGGCT CCTGGGGTGA GGAGGTCGTC GAGGTCGAGG ACGTCCCCGC CGCCGAGCGC TTCCTCGCCG AGGAGCTCCG CTCCGGCGAC GTGGTCCTCG TGAAGTCCTC CAACGGCTCT GGCCTGTGGC GGCTGGGCGA CGCGCTCACG GCGGTGACCT CGTGA
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Protein sequence | MIDLTAAEVA DLTGGTLAAP HTTRVHGPTV VDSRKVSAGA LFVALVGESS DGHDHAAGAV ADGAALVLAS RELDGLPCVV VDDVTRALGL VAAEHLRRLR ASGPLQVAAV TGSVGKTTTK DLLGHVLSES GPTVMPRASF NNEIGLPLTV LEAGPETRYL VLEMGASAPG DLTYLTGIAP PDVSIVLAVG AAHLGGFGGL DGVARAKSEI VTGLRPEGVA VLNADDHRVV AMRDLAPSRV VTFGTVRDAG VRAHRVSVDR LGRVSCQVVV GERTADLSLR LVGEHHLTNA LAALTAAVEL GVDLDTAAAL VSSVDAASPH RMAVTERPDG VTVIDDSYNA NPDSMRAALK ALAVVAGRDR RSVAVLGEML ELGPDSRDQH DEIGRLVVRL NIKLLVVVGA GASGLADGAT QEGSWGEEVV EVEDVPAAER FLAEELRSGD VVLVKSSNGS GLWRLGDALT AVTS
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