Gene Sked_22830 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_22830 
Symbol 
ID8633918 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp2537870 
End bp2538997 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content67% 
IMG OID 
ProductPhospho-N-acetylmuramoyl-pentapeptide- transferase 
Protein accessionYP_003315032 
Protein GI269795577 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.015392 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGGCTG GGCGACGCGC TCACGGCGGT GACCTCGTGA TCGCGGTCCT CGCGTCGGTC 
TCGGTCTCGC TGCTCGTCGC GCTCTTCGGC ACGCCGCTCT TCATCAAGCT GCTCGTCAAG
CGCAACTACG GGCAGTTCAT CCGCCAGGAC GGTCCGACGG CGCACTTCAC CAAGCGCGGG
ACGCCGACCA TGGGCGGGGT CGTCATCATC GGCGCCACGC TCGCCGGCTG GGCCGCGGCG
TCGATCGTCA GCGGTCGCCT GCCGTCGGCC TCGTCGCTGC TCGTCATCTT CCTCATGACC
GGCCTCGGGC TCGTGGGCTT CCTCGACGAC TACATCAAGA TCTCGAGGCA GCGCAGCCTG
GGGCTCTCCG CACGCTGGAA GATCGTCGGC CAGGGCATCG TCGGGGTCAC CTTCGCGGTG
CTCGCGCTGC AGTTCCCCAA CGCGAACTTC CGCACGCCCG CCTCGACGAG CGTGTCGTTC
ATCCGGGACA CCAACATCGA CCTCGCCTTC GCGGGCGTGA CGGTCGGCCT CATCCTCTTC
GTCCTCTGGG CGAACCTCAT CATCACGGCG TGGTCCAACG CGGTGAACCT CACCGACGGG
CTGGACGGTC TCGCCACCGG GGTCTCGCTC ATCGTCTTCG GCGGGTACGT CATCGTCTCG
ATCTGGCAGC TCAACCAGAA CTGCCAGCTG GCCAGCGCCG TCGGTCCTCG CTGCTACGAG
GTCCGCGACC CGCTCGACCT CGCGATCGTG GCTGCGGCCA TCATGGGCGC CTGCTTCGGG
TTCCTCTGGT GGAATGCGTC GCCCGCCAAG ATCTTCATGG GCGACACCGG CTCGCTCGCG
CTGGGTGGCG CCCTGGCCGG CCTGTCGATC CTGTCGCGCA CCGAGCTGCT CGCCATCATC
ATGGGTGGCC TGTTCGTCAT CATCGTCCTC TCGGACGTCA TCCAGATCGG CTTCTTCAAG
ATGACCGGCC GGCGGGTGTT CAAGATGGCA CCGCTGCACC ACCACTTCGA GCTCTCGGGG
TGGGGCGAGG TCACGATCGT CATCAGGTTC TGGATCATCG CCGGGCTGTT CACCGCCCTC
GGCCTCGGCA TCTTCTACGC AGAGTGGGTC GTCGGTTGGG TCCGCTGA
 
Protein sequence
MAAGRRAHGG DLVIAVLASV SVSLLVALFG TPLFIKLLVK RNYGQFIRQD GPTAHFTKRG 
TPTMGGVVII GATLAGWAAA SIVSGRLPSA SSLLVIFLMT GLGLVGFLDD YIKISRQRSL
GLSARWKIVG QGIVGVTFAV LALQFPNANF RTPASTSVSF IRDTNIDLAF AGVTVGLILF
VLWANLIITA WSNAVNLTDG LDGLATGVSL IVFGGYVIVS IWQLNQNCQL ASAVGPRCYE
VRDPLDLAIV AAAIMGACFG FLWWNASPAK IFMGDTGSLA LGGALAGLSI LSRTELLAII
MGGLFVIIVL SDVIQIGFFK MTGRRVFKMA PLHHHFELSG WGEVTIVIRF WIIAGLFTAL
GLGIFYAEWV VGWVR