Gene Sked_22730 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_22730 
Symbol 
ID8633908 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp2527223 
End bp2527885 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content69% 
IMG OID 
ProductDivIVA protein 
Protein accessionYP_003315022 
Protein GI269795567 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0597126 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGGCAC TGCTCACTGC AGATGACGTC CTGACGAAGA AGTTCCCGGC GACCAAGTTC 
CGAGAGGGGT ACGACGTCGT CGAGGTCGAC GACTTCCTCG ACGAGGTCCT GACCACGCTC
CGCGAGCTGT ACGCCGAGAA CGACGACCTC AAGGCGAAGC TCGAGGCGTC CGAGCGCCGT
GTCGCGGAGC TCAGCCGCGC GAACGCGCAG CAGCAGTCCG AGCCGCGCCC CGTGTCGGTC
GAGAAGGCCG TCGAGGAGCC CAAGCCTGTC GTGGCACCCG TGGCCGAGCC TGCGCCCGTC
GCGGCCCCGG CGCTCACGCC CCGCGAGCCC GAGATGGCGA CCGGCATCAT CCAGATGGCG
CAGAAGCTGC ACGACGACCA CGTGCGCGCC GGCCAGGAAG AGGGCGACCG ACTCATCGCC
GAGGCCAAGA GCGAGGGCAA CCGCATCGTC CGCGAGGCCG AGGAGACCTC CTCGCGCACG
CTGTCCCAGC TCGAGCAGGA GCGGTCGCTC CTCGAGCGCA AGATCGACGA GCTCCGGATC
TTCGAGCGCG ACTACCGCAC CCGCCTCAAG AGCTACCTGC AGAACCTGCT CGGCGACCTC
GACAACCGCG GCAGCGCGCT GCCGAGCGGC GGCTCGTCCG GTCAGGACAA GCAGGGCATC
TGA
 
Protein sequence
MVALLTADDV LTKKFPATKF REGYDVVEVD DFLDEVLTTL RELYAENDDL KAKLEASERR 
VAELSRANAQ QQSEPRPVSV EKAVEEPKPV VAPVAEPAPV AAPALTPREP EMATGIIQMA
QKLHDDHVRA GQEEGDRLIA EAKSEGNRIV REAEETSSRT LSQLEQERSL LERKIDELRI
FERDYRTRLK SYLQNLLGDL DNRGSALPSG GSSGQDKQGI