Gene Sked_22680 details

Gene Information

• Locus tag: Sked_22680
• ID: 8633903
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sanguibacter keddieii DSM 10542
• Kingdom: Bacteria
• Replicon accession: NC_013521
• Strand: -
• Start bp: 2520842
• End bp: 2524387
• Gene Length: 3546 bp
• Protein Length: 1181 aa
• Translation table: 11
• GC content: 67%
• Product: DNA polymerase III, alpha subunit
• Protein accession: YP_003315017
• Protein GI: 269795562

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 18
• Fosmid unclonability p-value: 0.149072
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGTCGTCTG CGCCCCCTCG TTCTGAGGAC TTCGTCCACC TGCACGTGCA CACCGAGTAT 
TCGATGCTCG ACGGGGCGGC CCGCCTCGGG GACCTCTTCG AGGAGACCAA GAGGGTCGGC 
CAGAGCGCGA TCGCGACGAC CGACCACGGG TACCTCTTCG GGGCGTATGA CTTCTGGAAG 
CAGGCGACCG ACGCGGGCGT GAAGCCCATC ATCGGTGTCG AGGCGTACGT CACCCCTGGG 
ACGTCGCGCT TCGACAACAC CCGTGTGCGC TGGGGCGACG CGAGCCAGGC GAGCGACGAC 
GTCTCCGCCC GTGGTGCGTA CACCCACCTG ACGATGTGGG CCCGCAACAA CGAGGGGATG 
CACAACCTCT TCCGGGCGAG CTCCCTCGCC TCCCTCGAGG GGCAGATGGG CAAGTGGCCC 
CGCATGGACC GGGACCTGCT CGAGCGGTAC AGCCCAGGTC TCATCGCGTC GACCGGGTGC 
CCCTCGGGCG AGGTCCAGAC GCGTCTGCGG CTCGGTCACT ACGACGAGGC CGTGAAGGCT 
GCCGGTGAGC TCCAGGACAT CTTCGGCAAG GAGTACTTCT ACGTCGAGCT CATGGACCAC 
GGGCTCGACA TCGAGACGCG CGTCTTCAAG GACCTGCTGC GCCTCGCCAA GGACATCGGC 
GCCCCGATCG TGGCGACCAA CGACCTGCAC TACGTGCGCC AGGAGGACAG CGGCTCGCAG 
GAGGCGCTGC TCGCCATCAA CTCGGGCTCG ACCCTCACCG ACCCGGACCG CTTCAAGTTC 
GACGGCGACG GCTACTACGT CAAGTCCGCC GCAGAGATGC GCCGCCTCTG GAAGGAGCTC 
CCGGAGGCCT GCGACAACAC GCTCGTCATC GCCGAGCAGT GCGAGGTCTC GTTCAACACG 
GCTGCCAACT ACATGCCGAA TTTCCCGGCC CCGGCGGGCG AGGACGAGAC GTCCTGGTTC 
ATCAAGGAGG TCGAGACCGG TCTGCAGTAC CGGTACCCGG ACGGGATCCC GACCGAGGTG 
CGCGAGCGCG CCGACTTCGA GACCAAGGTC ATCACCCAGA TGGGCTTCCC GGGGTACTTC 
CTCGTGGTCG CCGACTTCAT CAACTGGTCC AAGGACAACA ACATCCGTGT GGGACCCGGC 
CGCGGTTCGG GTGCCGGGTC GATGGTCGCG TACGCGATGC GCATCACCGA CCTCGACCCG 
CTCGTCCACG GTCTGATCTT CGAGCGCTTC CTCAACCCGG ACCGCGTCTC CATGCCCGAC 
TTCGACGTCG ACTTCGACGA GCGTCGCCGC GGCGAGGTGA TCCGGTACGT CACCGACAAG 
TACGGCGAGG ACCGCGTCGC GCAGATCGTC ACCTACGGCA CCATCAAGGC CAAGCAGGCG 
CTCAAGGACT CGAGCCGCCT CCTCGGCCTG CCCTACGCCA TGGGCGACAA GCTCACCAAG 
GCGATGCCGC CGGCGATCAT GGGCAAGGAC ATCAGCCTCA CCGGGATCTT CGACCCGGAC 
GACAAGCGCT ACTCGGAGGC GGAGGAGTTC CGCCAGGTCC ACGCAGCCGA CCCCGAGGCG 
CAGCGCGTCG TGGAGCTCGC CAAGGGCATC GAGGGCCTGA AGCGCCAGTG GGGCGTCCAC 
GCGGCCGGCG TCATCATGTC GAGCGAGCCG CTCATCGACA TCATCCCGAT CATGCGCCGC 
CTGCAGGACG GCGCCGTCAT CACGCAGTTC GACTACCCCA AGTGCGAAGA GCTCGGGCTC 
ATCAAGATGG ACTTCCTGGG GTTGCGCAAC CTCACCATCC TCGACGACGC CCTCGAGAAC 
ATCGTCATGA ACGGCAAGGA GGCGATCGAC CTCGAGAGCC TCACCCTCGA CGACCCGAAC 
ACCTACGCCC TGCTCTCCCG AGGGGACACG CTGGGCGTGT TCCAGCTCGA CGGCGGCGGC 
ATGCGCACGC TGCTCAAGCT CATGCGTCCC GACAACTTCG AGGACATCTC GGCCGTCGGT 
GCGCTCTACC GTCCGGGGCC GATGGGTGCG AACTCGCACA CCAACTACGC GCTCCGCAAG 
AACGGCCTGC AGGAGGTCGT CCCGATCCAC CCGGAGCTCG AGGAGCCGCT CGCCGAGGTC 
CTCGGGACCA CGCACGGTCT CATCGTGTAC CAGGAGCAGG TCATGTCGAT CGCGCAGATC 
GTCGCCGGGT TCTCGCTCGG CCAGGCAGAC ATCCTGCGTC GTGCCATGGG CAAGAAGAAG 
AAGTCCGAGC TGGACAAGCA GTTCGAGGGC TTCTCGGGCG GCATGGTCGA GCGCGGCTAC 
TCCATGGCCG CGGTCAAGGC GCTGTGGGAC ATCCTGCTGC CGTTCTCCGA CTACGCGTTC 
AACAAGGCCC ACTCGGCCGC GTACGGCGTG GTCTCGTACT GGACGGCGTT CCTCAAGGCG 
AACTACCCGA CCGAGTACAT GGCGGCGCTG CTCACCAGCG TCCGCGACGA CAAGGACAAG 
TCGGCGCTGT ACCTCAACGA GTGCCGGCGC ATGGGCATCA CGGTGCTGCC GCCGGACGTC 
AACTCGTCGT CGGCGAACTT CACCGCCGTC GGCAAGGACA TCCGCTTCGG GCTGACGGCC 
GTCCGCAACG TGGGGGCGAA CGTCGTCGAG GCGATCGTCA CCACGCGGGA GGCGAAGCAG 
AACTTCACGT CCTTCACGGA CTTCCTCGAC AAGGTCCCGG CGGTGGTCTG CAACAAGCGG 
ACCATCGAGT CGCTCATCAA GGCCGGGGCC TTCGACTCGC TCGACCACCC CCGCCGCGCG 
CTCCAGGTGG TCCACGAGCA GGCGGTGGAC TCGGTGATCG GCGTCAAGCG CAAGGAGGCC 
GAGGGGCAGT TCGACCTCTT CGCCGGCTTC GGCGACGAGG CGGACGACGG GATGTCGTTC 
AGCGTGGACA TCCCGGACCT GCCCGACTGG GAGAAGAAGC AGCTGCTCGC CTTCGAGCGG 
GAGATGCTCG GGCTCTACGT CTCGGACCAC CCGCTCTCCG GGCTCGAGCA CGTGCTGCAG 
CAGGCCGCCG AGGTGTCGAT CGCCAAGCTG CTCACCGACG AGGACCGCCC GGACGGCTCG 
ACCGTCGTCA TCGCCGGTCT CATCACCTCG CTCCAGCGCA AGATGTCCAA GCAGGGCAAC 
CCGTGGGCCG CGGTGACCAT CGAGGACCTC GACGGCGGCG TCGAGGTGAT GTTCTTCGGC 
GAGACGTACA TGGCCTACTC CACGATCCTC GCCGAGGACC AGGTGGTGGT GCTGCGCGGT 
CGCGTGCGCC GCCGGGACGA CACCATGCAG CTCCAGGCCA TGGAGGTGTC GCTGCCCGAC 
ATCTCGACGG GGACCGACTC GCCGCTGATC ATCACGATCC CGCGGAACCG GTGCCTCGAG 
CAGATCGTGG TCAGGCTGCG TGACGCGCTC AAGACGCACC CGGGCGACGC CCAGGTACGG 
ATCCACGTCA CCGAGCCGGG GAAGACGACC GTGGTCCAGG CGCACGACCA GTTCAGGGTG 
TCGAAGTCCT CGGCGCTGTC AGGCGAGCTC AAGGCCCTGC TGGGACCCGC CTGCCTCACC 
GTGTGA 

 

Protein sequence

MSSAPPRSED FVHLHVHTEY SMLDGAARLG DLFEETKRVG QSAIATTDHG YLFGAYDFWK 
QATDAGVKPI IGVEAYVTPG TSRFDNTRVR WGDASQASDD VSARGAYTHL TMWARNNEGM 
HNLFRASSLA SLEGQMGKWP RMDRDLLERY SPGLIASTGC PSGEVQTRLR LGHYDEAVKA 
AGELQDIFGK EYFYVELMDH GLDIETRVFK DLLRLAKDIG APIVATNDLH YVRQEDSGSQ 
EALLAINSGS TLTDPDRFKF DGDGYYVKSA AEMRRLWKEL PEACDNTLVI AEQCEVSFNT 
AANYMPNFPA PAGEDETSWF IKEVETGLQY RYPDGIPTEV RERADFETKV ITQMGFPGYF 
LVVADFINWS KDNNIRVGPG RGSGAGSMVA YAMRITDLDP LVHGLIFERF LNPDRVSMPD 
FDVDFDERRR GEVIRYVTDK YGEDRVAQIV TYGTIKAKQA LKDSSRLLGL PYAMGDKLTK 
AMPPAIMGKD ISLTGIFDPD DKRYSEAEEF RQVHAADPEA QRVVELAKGI EGLKRQWGVH 
AAGVIMSSEP LIDIIPIMRR LQDGAVITQF DYPKCEELGL IKMDFLGLRN LTILDDALEN 
IVMNGKEAID LESLTLDDPN TYALLSRGDT LGVFQLDGGG MRTLLKLMRP DNFEDISAVG 
ALYRPGPMGA NSHTNYALRK NGLQEVVPIH PELEEPLAEV LGTTHGLIVY QEQVMSIAQI 
VAGFSLGQAD ILRRAMGKKK KSELDKQFEG FSGGMVERGY SMAAVKALWD ILLPFSDYAF 
NKAHSAAYGV VSYWTAFLKA NYPTEYMAAL LTSVRDDKDK SALYLNECRR MGITVLPPDV 
NSSSANFTAV GKDIRFGLTA VRNVGANVVE AIVTTREAKQ NFTSFTDFLD KVPAVVCNKR 
TIESLIKAGA FDSLDHPRRA LQVVHEQAVD SVIGVKRKEA EGQFDLFAGF GDEADDGMSF 
SVDIPDLPDW EKKQLLAFER EMLGLYVSDH PLSGLEHVLQ QAAEVSIAKL LTDEDRPDGS 
TVVIAGLITS LQRKMSKQGN PWAAVTIEDL DGGVEVMFFG ETYMAYSTIL AEDQVVVLRG 
RVRRRDDTMQ LQAMEVSLPD ISTGTDSPLI ITIPRNRCLE QIVVRLRDAL KTHPGDAQVR 
IHVTEPGKTT VVQAHDQFRV SKSSALSGEL KALLGPACLT V