Gene Sked_22510 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_22510 
Symbol 
ID8633886 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp2503943 
End bp2504674 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content75% 
IMG OID 
Product1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino) imidazole-4-carboxamide isomerase 
Protein accessionYP_003315000 
Protein GI269795545 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGACC GTCTCGTCCT TCTGCCCGCC GTCGACGTCG CCGAGGGGCA GGCCGTCCGC 
CTCGTCCAGG GCGAGGCCGG CTCCGAGACC TCCTACGGCG ACCCGCTGAC CGCCGCCCTC
GACTGGCAGT CCGGGGGCGC CGAGTGGGTG CACCTGGTCG ACCTCGACGC CGCGTTCGGC
CGTGGCTCCA ACGCCGAGCT GCTCGCCGAC GTCGTGGCGC GCCTCGACGT CAAGGTCGAG
CTCTCGGGCG GCATCCGCGA CGACGCCTCG CTCGAGCGCG CCCTCGCGAC CGGCTGCGCC
CGGGTCAACC TGGGCACGGC CGCCCTCGAG AACCCCGAGT GGACCGCCCG GGTCATCGCC
GAGCACGGCG ACGCCATCGC CGTCGGCCTG GACGTCCGTG GCACCACCCT CGCGGCGCGC
GGCTGGACCC AGGAGGGCGG CGACCTCTGG GAGGTCCTCG AGCGCCTCGA CCAGGCCGGG
TGCTCGCGCT ACGTCGTCAC CGACGTGACG AAGGACGGGA CGCTGCGCGG CCCGAACATC
GAGCTGCTGC GCGACGTCGC GGCGAAGACC TCGGCGCCCG TCGTCGCCTC GGGCGGGATC
TCGAGCCTCG ACGACCTCGC CGCGCTGCGC GAGCTCGTCG GGTCCGGCGT CGAGGGCGCG
ATCGTGGGCA AGGCGCTCTA CGCAGGCGCC TTCACGCTGC CGCAGGCGCT CGACGTCGCC
GGTCGCCCGT GA
 
Protein sequence
MTDRLVLLPA VDVAEGQAVR LVQGEAGSET SYGDPLTAAL DWQSGGAEWV HLVDLDAAFG 
RGSNAELLAD VVARLDVKVE LSGGIRDDAS LERALATGCA RVNLGTAALE NPEWTARVIA
EHGDAIAVGL DVRGTTLAAR GWTQEGGDLW EVLERLDQAG CSRYVVTDVT KDGTLRGPNI
ELLRDVAAKT SAPVVASGGI SSLDDLAALR ELVGSGVEGA IVGKALYAGA FTLPQALDVA
GRP