Gene Sked_22130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_22130 
Symbol 
ID8633848 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp2463286 
End bp2465037 
Gene Length1752 bp 
Protein Length583 aa 
Translation table11 
GC content74% 
IMG OID 
ProductDNA replication and repair protein RecN 
Protein accessionYP_003314966 
Protein GI269795511 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.120117 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTCCACG AGATGAGCAT CGAGAACCTG GGCGTCATCA GCCGCACCCG GGTCGAGTTC 
TCGCCCGGTC TCACGGTGAT CACCGGTGAG ACCGGTGCCG GCAAGACCAT GATCCTCAGC
GGCCTCGGCC TGCTCATGGG CGGCAAGGCC GACGCGCAGG TCGTGCGCAC CGGTACCGAC
GCCGCCGTGG TCGAGGGACG CGTCGTGGCG GACAGCGCCT CGCTCGCCGC GCGTGTCGAC
GAGACCGGCG CCGTCCTCGA CGACGACGGC AGCCTGCTCA TCGTCCGCAC CGTCGCCGCG
CAGGGACGCT CACGCACCCA CCTCGGTGGA CGCTCCGTGC CGCAGGCCGT GCTCGCCGAC
CTCGCCGAAG ACCTCGTGAC CATCCACGGC CAGTCGGACC AGATGCGCCT GCGCTCCCCG
CAGCGCCAGC GCGAGGCCCT CGACTCCTTC GCCGGGGAGG TCGTCACCAC GGCCCTCGCC
GAGTACCGGG CGCTGTGGAA CGAGCGCGCC GCCTCCGCAG CCGAGCTCGA AGAGCTCGTC
GGGCGTGCCC AGGAGCGCGC CCGCGAGGCC GAGCTGCTCC GCCTCGGCCT CGCGGAGGTC
GAGCGGGTGG CACCCCAGCC GGGGGAGGAC ACCGAGCTCG CCCAGGAGGC CGAGCGCCTC
AGCAACTCCG AAGAGCTCCG CACCGCCGCC CAGGACGCGC TGCTGGCCGT CGCGGGCGAC
GACCTCGCCG ACGTGGCGGT CGGCTCGGGC TCGAACGCCG TCGAGCTCGT CGACCGTGCC
CGTCGGCTCG CCGAGCACGG CGGCCAGTTC GACCCCGAGC TCGAGGCCGT CGGCAAGTCC
CTGGCGTCGG TGGCCTACGC CCTGGCCGAC GTCGGCACCG AGCTCTCCGG GTACCTGGCG
GCGCTCGACG CGGACCCGGC ACGGCTCGAG ACCGTCGAGG CACGCCGCGC CGAGCTCGGG
CACCTCACGC GGTCCTACGG CGAGACCGTC GACGAGGTCC TCGCCTGGGC GTCGACCTCG
GGGCTGCGGC TCGCCGAGCT CGACGACTCG GACGGTCGCA TCGAGGTCCT CACCGAGTCG
CTCGCGGCGC TCGACGCACG CCTCGTCGAG CGTGCCGCCG CACTGACCGC CGCCCGTACC
GCGGCCGCGG TCTCGCTCTC CGACGCGGTG ACCGAGGAGC TCACCGGGCT GGCGATGTCC
GGGGCCACCC TCACCATCGA GATCGACACC CTCGAGGACC TCGGTCCGTG GGGTGCCGAC
AGCGTCCAGA TGCTCCTCAG CGCGCACCGC GGCGGACCCC CCCGCCCCCT CGGCAAGGGC
GCCTCGGGCG GTGAGCTGTC CCGCGTGATG CTCGCGATCG AGGTCGCCCT CGCCACGGCC
GACGCCTCCG GCGCGCGCCG CACCCCGACG ATGGTGTTCG ACGAGGTCGA CGCCGGGGTC
GGCGGCAAGG CGGCGCTCGA GGTCGGGCAG CGCCTGGCCC GCCTCGCGCG GACCACGCAG
GTGATCGTCG TCACGCACCT CGCGCAGGTC GCGGCCTACG CGGACGTCCA GCTCGTGGTG
TCCAAGGGGG CCAGCGCGCA GGGCGCCGAC GGGCAGGACG CGGACGCCGA CGTCATCACA
CAGTCGGGCA TCCGCATCGT CGCAGGTGAC GACCGCGTGC AAGAGCTCGC ACGCATGCTC
TCGGGGCAGG ACTCCGAGGC CGCGCTCAGC CACGCGGCGG AGCTTCTCGA GCGTGCCGCT
GTGAGAACAT GA
 
Protein sequence
MLHEMSIENL GVISRTRVEF SPGLTVITGE TGAGKTMILS GLGLLMGGKA DAQVVRTGTD 
AAVVEGRVVA DSASLAARVD ETGAVLDDDG SLLIVRTVAA QGRSRTHLGG RSVPQAVLAD
LAEDLVTIHG QSDQMRLRSP QRQREALDSF AGEVVTTALA EYRALWNERA ASAAELEELV
GRAQERAREA ELLRLGLAEV ERVAPQPGED TELAQEAERL SNSEELRTAA QDALLAVAGD
DLADVAVGSG SNAVELVDRA RRLAEHGGQF DPELEAVGKS LASVAYALAD VGTELSGYLA
ALDADPARLE TVEARRAELG HLTRSYGETV DEVLAWASTS GLRLAELDDS DGRIEVLTES
LAALDARLVE RAAALTAART AAAVSLSDAV TEELTGLAMS GATLTIEIDT LEDLGPWGAD
SVQMLLSAHR GGPPRPLGKG ASGGELSRVM LAIEVALATA DASGARRTPT MVFDEVDAGV
GGKAALEVGQ RLARLARTTQ VIVVTHLAQV AAYADVQLVV SKGASAQGAD GQDADADVIT
QSGIRIVAGD DRVQELARML SGQDSEAALS HAAELLERAA VRT