Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_22120 |
Symbol | |
ID | 8633847 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | - |
Start bp | 2462090 |
End bp | 2463280 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | uncharacterized membrane-anchored protein |
Protein accession | YP_003314965 |
Protein GI | 269795510 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00627059 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.779983 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCTCA GACGACGATC GACTGCCAAG GATGCGGCGC ACCCTCTGCA GGGAGTCACG GGGACCGCCA AGGTCGACCG ACGGACCAAA GATCTCACCA AGCGCCTGCG CCCCGGCGAC ATCGCGGTGA TCGACCACCT CGACATCGAC CGTGTCGCCG CCGAGGCGCT CGTGGCCGCC CAGCCCTCCG CGGTGCTCAA CGCCGCGAAG TCGATCTCCG GGCGCTACCC CAACCTCGGC CCCAGCATCC TCGTCGAGGC CGGCGTCGTC CTCGTCGACG ACCTCGGGGC CGACGTGATG TCCGTGCGCG AGGGCAAGAC CCTGCGCATC GACGACGGTG CCGTGTACCT CGGGGACACC CTCGTCACCG AGGGGGTCGT CCAGGACGTC GAGAGCGTCA CCCGCGACCT CGAGGAGGCC CGCGAGGGCC TCTCCGCCCA GCTGGAGTCC TTCGCGGCCA ACACCATGGA CTACCTCCGG CGCGAGCGGG ACCTGCTGCT CGACGGCGTC GGCATCCCGG AGATCTCCAC CAAGATCGCC GGTCGCCAGG TGCTCATCGT CGTCCGCGGG TACCACTACC GCGAAGACCT CAAGACGCTG CGCTCCTACA TCAAGGAGTT CCGCCCCATC CTCATCGGCG TCGACGGCGG CGCCGACGCG ATCATCGAGG CGGGCTGGAG CCCGGACCTC ATCGTCGGCG ACATGGACTC CGTCTCCGAC AAGGCGCTGC GCTGCGGCGC CGAGGTCGTG GTGCACGCCT ACCGCGACGG CCGCGCCCCC GGGCTCGAGC GCGTCGAGGC GCTCGCCGTG CCCTTCGTCG TGTTCCCCGC CGCGGGCACC AGCGAGGACA TCGCGATGCT GCTCGCCGAC GACATGGGTG CCGAGGTGAT CGTCGCCGTC GGCACGCACG CCACGCTCGT GGAGTTCCTC GACAAGGGGC GCGCCGGCAT GGCGAGCACC TTCCTCACCC GCCTGCGCGT CGGCGGCAAG CTCGTCGACG CCAAGGGCGT CTCGCGCCTC TACCGGCACC GCATCTCGAC GGCCCAGCTG ATCCTGCTGG CCGTCGCGGG TATCGCCGCC GTCGTCGCGG CGATGGTCTC GACGTCCGTC GGGCAGACCT TCCTCGGGTT GACCGGGGCA CGCATCGACG ACCTCTGGTC GTGGGTCGTC TCCCTGGCCT GGTGGACCTG A
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Protein sequence | MKLRRRSTAK DAAHPLQGVT GTAKVDRRTK DLTKRLRPGD IAVIDHLDID RVAAEALVAA QPSAVLNAAK SISGRYPNLG PSILVEAGVV LVDDLGADVM SVREGKTLRI DDGAVYLGDT LVTEGVVQDV ESVTRDLEEA REGLSAQLES FAANTMDYLR RERDLLLDGV GIPEISTKIA GRQVLIVVRG YHYREDLKTL RSYIKEFRPI LIGVDGGADA IIEAGWSPDL IVGDMDSVSD KALRCGAEVV VHAYRDGRAP GLERVEALAV PFVVFPAAGT SEDIAMLLAD DMGAEVIVAV GTHATLVEFL DKGRAGMAST FLTRLRVGGK LVDAKGVSRL YRHRISTAQL ILLAVAGIAA VVAAMVSTSV GQTFLGLTGA RIDDLWSWVV SLAWWT
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