| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_22080 |
|---|
| Symbol | |
|---|
| ID | 8633843 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | - |
|---|
| Start bp | 2455472 |
|---|
| End bp | 2457136 |
|---|
| Gene Length | 1665 bp |
|---|
| Protein Length | 554 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | |
|---|
| Product | CTP synthase |
|---|
| Protein accession | YP_003314961 |
|---|
| Protein GI | 269795506 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.202828 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.968992 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAACAGGC TCCAGTCCAG CAACCGAGTC CGGTCGGAAT CGACGACACG GCACATCTTC
GTGACCGGGG GTGTCGCCTC CTCCCTGGGT AAGGGACTGA CGGCGTCCAG CCTCGGTCGA
CTGCTCCGGG CCCGCGGGCT CCGAGTCACC ATGCAGAAGC TCGACCCGTA CCTCAACGTG
GACCCGGGCA CCATGAACCC GTTCCAGCAC GGTGAGGTCT TCGTCACCGA GGACGGGGCC
GAGACCGACC TCGACATCGG GCACTACGAG CGCTTCCTCG ACGTCGACCT CGAGGCGGCG
GCGAACGTCA CGACCGGCCA GGTGTACTCC CAGGTCATCG CCAAGGAACG ACGCGGCGAG
TACCTCGGCG ACACCGTCCA GGTCATCCCG CACATCACCG ACGAGATCAA GAGCCGCATG
CGTGCGCAGG CGAGCGACGA CGTCGACGTG ATCATCACCG AGATCGGCGG GACCGTCGGG
GACATCGAGT CCCAGCCCTT CCTCGAGGCC GCCCGTCAGG TGCGCCACGA GCTCGGCCGC
GACGACGTGT TCTTCCTCCA CGTCTCCCTC GTGCCGTACA TCGGCCCGAG CGGAGAGCTC
AAGACGAAGC CGACCCAGCA CTCGGTCGCC GCGCTGCGCA GCATCGGCAT CCAGCCCGAC
GCGATCGTGC TCCGCTCGGA CCGCGAGGTC CCCGAGGGCA CCAAGCGCAA GATCGCGCTG
TTCTGCGACG TCGACAACGA GGCCGTCATC AACTGCATGG ACGCGCCGAG CATCTACGAC
ATCCCGCGGG TCATCCACTC GGAGGGCCTC GACGCCTACG TCGTGCGCCG CCTCGGCCTG
CCCTTCCACG ACGTGGACTG GGACGGCTGG TCGCAGCTCC TCGAGCGCGT GCACGAGCCC
GCGCACCGCG TGGAGATCGC GCTCGTCGGC AAGTACATCG ACCTCCCCGA CGCGTACCTC
TCGGTCACCG AGGCGCTGCG CGCCGGCGGG TTCGCCAACG ACACCAAGGT CGTCATCCGC
TGGGTCCCGT CCGACGACTG CCAGACCCCA GAGGGCGCCC AGACGTCCCT CGAGGGCGTC
GACGCGGTCC TCGTCCCCGG CGGCTTCGGC GTGCGCGGCA TCGAGGGCAA GCTCGGCGCG
CTGCGCTGGG CGCGCGAGGG CGGCGTGCCG ACGCTCGGCA TCTGCCTCGG CCTGCAGTCC
ATGGTCATGG AGTACGCACG GAACGTCGTC GGGCTCGAGG GCGCGTCGTC GTCGGAGTTC
GACCCGGCGA CCCCGCACCC GGTGATCGCG ACCATGGCGG AGCAGCAGAG CTTCGTCGAC
GGCGCGGGCG ACCTCGGCGG CACCATGCGC CTGGGCGCCT ACGACGCGGC CCTCGCGCCG
GGGTCCGTCG CGGCCGGCGT GTACGGCTCG GAGCTCGTGT CGGAGCGTCA CCGCCACCGC
TACGAGGTGA ACAACGCCTA CCGCGCGCAG CTCGAGGAGG CCGGGCTGGT CTTCTCCGGC
ACCTCGCCCG ACGGCACCCT CGTGGAGTTC GTCGAGCTGG CCAAGGACGT GCACCCGTTC
TACATCTCGA CGCAGGCGCA CCCCGAGTTC AAGTCCCGCC CGACCCGCGC GCACCCGCTG
TTCGCCGGTC TCGTCCGGGC TGCCCTCGAC CGCCAGGGCG TCTGA
|
|---|
| Protein sequence | MNRLQSSNRV RSESTTRHIF VTGGVASSLG KGLTASSLGR LLRARGLRVT MQKLDPYLNV
DPGTMNPFQH GEVFVTEDGA ETDLDIGHYE RFLDVDLEAA ANVTTGQVYS QVIAKERRGE
YLGDTVQVIP HITDEIKSRM RAQASDDVDV IITEIGGTVG DIESQPFLEA ARQVRHELGR
DDVFFLHVSL VPYIGPSGEL KTKPTQHSVA ALRSIGIQPD AIVLRSDREV PEGTKRKIAL
FCDVDNEAVI NCMDAPSIYD IPRVIHSEGL DAYVVRRLGL PFHDVDWDGW SQLLERVHEP
AHRVEIALVG KYIDLPDAYL SVTEALRAGG FANDTKVVIR WVPSDDCQTP EGAQTSLEGV
DAVLVPGGFG VRGIEGKLGA LRWAREGGVP TLGICLGLQS MVMEYARNVV GLEGASSSEF
DPATPHPVIA TMAEQQSFVD GAGDLGGTMR LGAYDAALAP GSVAAGVYGS ELVSERHRHR
YEVNNAYRAQ LEEAGLVFSG TSPDGTLVEF VELAKDVHPF YISTQAHPEF KSRPTRAHPL
FAGLVRAALD RQGV
|
|---|
| |