Gene Sked_22070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_22070 
Symbol 
ID8633842 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp2454811 
End bp2455470 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content74% 
IMG OID 
ProductNTP pyrophosphohydrolase 
Protein accessionYP_003314960 
Protein GI269795505 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.6252 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.820236 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACG GCGCCCAGGG AGCAGGCAGC ACCGAGCCTG TCGTCGACGT GCTCGCACCG 
CGAGAGGTCC TCGGCCACGA GGTCCTCGTG CAGGGTCGGA TCTTCGACCT CGTCCGTGAC
GAGGTCGACC TTGACCACTC CGTGGTGCAC CGCGAGTACG TCGACCACCC CGGCGCCGTC
GCCGTGGTCG TCCTCGACGA CCACGACAGG GTGCTGCTGC TCAGGCAGTA CCGTCACCCG
GTCCGCCGCG AGCTGTGGGA GCCGCCCGCC GGCCTCCTCG ACGTCGCAGG GGAGGCCGCG
CAGATCGGCG CAGCGCGCGA GCTCGCCGAG GAGGCCGACC TCGTCGCGGC CAGCTGGCAC
ACCCTCGTGG ACTACTACAC GACCCCCGGC GGCAACAACG AGGCCCTGCG GGTGTTCCTC
GCCCGTGACC TCAGCCCCGT CCCCGAGGCC GACCGCCACG TGCGCGAGGA CGAGGAGCGC
GACATCGAGC CGCGCTGGGT CCCGCTCGAC GAGGCTGCCG ACGCGGTGCT CCGCGGTGAT
CTGCACAACC CCTCGGCCGT GGTCGGCGTG CTCGCCGCGG TCGCCTCGCG CGCCGGCGGG
TGGGCCAGCC TGCGCCCGGC CGACGCGCCG TGGCCCGAGC GACGCCAGGC GCAGGACTGA
 
Protein sequence
MSDGAQGAGS TEPVVDVLAP REVLGHEVLV QGRIFDLVRD EVDLDHSVVH REYVDHPGAV 
AVVVLDDHDR VLLLRQYRHP VRRELWEPPA GLLDVAGEAA QIGAARELAE EADLVAASWH
TLVDYYTTPG GNNEALRVFL ARDLSPVPEA DRHVREDEER DIEPRWVPLD EAADAVLRGD
LHNPSAVVGV LAAVASRAGG WASLRPADAP WPERRQAQD