Gene Sked_21990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_21990 
Symbol 
ID8633834 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp2444663 
End bp2445463 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content73% 
IMG OID 
ProductABC-type multidrug transport system, permease component 
Protein accessionYP_003314952 
Protein GI269795497 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.164668 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.979168 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACCG CGACCCCCAG CACCACACCG CGCCCCGTCC CCGCACCGAG CACCGCCGGC 
GCCGCCTCCG CGCGCCGCCG GGTGCTCTCG CAGTCGGCCT TCGAGGCCCG GGCGATCCTG
CGCAACGGCG AGCAGCTCAT GGTGACGATC CTGCTGCCGG TGATGGCCCT GATCGGCCTC
ACCCAGACCT CGATCGTCGA GATCGACACC GGCGGCGCCT CACGCATCGA CTTCATGACG
CCGGGTGTCA TCGCCCTGGC CGTGATGAGC GCCGCCTTCA CGTCCCAGTC GATCGCCACG
GCCTTCGACC GGCGCAACGG GGTGCTGCGC CTCATGGCCA CCACACCGCT CGGGCGCGGT
GGCCTGCTCA CCTCGAAGAT CATCGGCGTG CTCACCGTCG AGGCGGTGCA GATCGCCGTC
ATCACGGTGG TCGCGGTGGT GCTCGGCTGG CGCCCGGACC CTGCGGGCAT CCCGCTCGCG
GTCGTCGCGG TGCTCCTCGG GACCGCGGCC TTCACGTCGC TCGCGCTCCT GCTCGCCGGG
ACGCTGCGGG CCGAGGGCGT GCTCGCGGTC GCGAACATCG TCCTCGTGCT CCTCGTGGTC
CTCGGCGCGG TGCTCACCTC GGCCGACCAG CTCCCGGGTG CGCTGCGGCA CGTCGCGCTG
CTGCTGCCGT CCGGGGCGCT CGGCGAGGCC GTCCGCGGGG CCTTCCTCGA CGGTGCGATC
CCCGCCTTCT CGCTGGTCGT GCTCTTCGGC TGGACGGCAG CCCTCGGCTG GGGTGCTGGC
AAGCTCTTCC GCTGGAGCTG A
 
Protein sequence
MSTATPSTTP RPVPAPSTAG AASARRRVLS QSAFEARAIL RNGEQLMVTI LLPVMALIGL 
TQTSIVEIDT GGASRIDFMT PGVIALAVMS AAFTSQSIAT AFDRRNGVLR LMATTPLGRG
GLLTSKIIGV LTVEAVQIAV ITVVAVVLGW RPDPAGIPLA VVAVLLGTAA FTSLALLLAG
TLRAEGVLAV ANIVLVLLVV LGAVLTSADQ LPGALRHVAL LLPSGALGEA VRGAFLDGAI
PAFSLVVLFG WTAALGWGAG KLFRWS