Gene Sked_21980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_21980 
Symbol 
ID8633833 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp2443752 
End bp2444666 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content74% 
IMG OID 
ProductABC-type multidrug transport system, ATPase component 
Protein accessionYP_003314951 
Protein GI269795496 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.110747 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCTCCA ACCCCGCAGT CGAGATCACC GGCCTCGTCA AGAGGTACGA CGGCCGAGAG 
ATCGTCCGCA GCCTCGACCT CACCGCCCAC CACGGACAGG TCACCGCCGT CCTCGGCCCC
AACGGTGCCG GCAAGACGAC GACGATCGAG TGCTGCGAAG GCCTGCGCCT CCCGGACGGC
GGCTCCGTCC GGGTCCTCGG CCTGGACCCC GTCACCGACA GCGCGGCCCT GCGCCCGCGC
GTCGGCGTGA TGCTCCAGGA CGGCGGGCTG CCCACGTCGG TCCGCGCCCT CGAGATGCTC
CGCCACGTCG CGACGATGTA CGCCGAGCCC TGGGACGTCG ACGACCTCGT CGAGCGCCTC
GGGCTCGCCA GCTTCGCGCG GACCACCGTC CGCAGGCTGT CGGGGGGCCA GCGCCAGCGC
CTCGCGCTCG CCGCTGCCCT CGTCGGGCGC CCCGAGCTCG TGTTCCTCGA CGAGCCGAGC
GCGGGCATGG ACCCGCAGAG CCGGCACGCC GTGTGGGAGC TCGTCCGGGC GCTGCGCGAG
CAGGGTGTGA GCATCGTGCT CACCACCCAC CTCATGGACG AGGCCGAGGA GCTCGCCGAC
CGGGTGGTCG TGGTCGACCA CGGCCAGGTG ATCGCCGAGG GCACCCCGGC CGAGCTCGTG
TCCGGGTCGA CCGGCGCGCT GACCTTCGCG GCCGCGGCCG GCATCGAGAC CCTCTCGCTC
GCGAGCGCCC TGGGCGCCGG CGTCCGCGAG ACCACCCCCG GCAGCTACTC GGTCTCCGGC
GCCGTCACAC CGGCCACCCT GGTCTCGCTC ACCCGCTGGT GCGCCGACAG GTCGATCCTG
CTCTCCCGCG TCTCGACCGG GCGCCGCACC CTCGAGGACG TCTTCCTCGA CCTCACCGGA
CGGAGCCTGC GATGA
 
Protein sequence
MPSNPAVEIT GLVKRYDGRE IVRSLDLTAH HGQVTAVLGP NGAGKTTTIE CCEGLRLPDG 
GSVRVLGLDP VTDSAALRPR VGVMLQDGGL PTSVRALEML RHVATMYAEP WDVDDLVERL
GLASFARTTV RRLSGGQRQR LALAAALVGR PELVFLDEPS AGMDPQSRHA VWELVRALRE
QGVSIVLTTH LMDEAEELAD RVVVVDHGQV IAEGTPAELV SGSTGALTFA AAAGIETLSL
ASALGAGVRE TTPGSYSVSG AVTPATLVSL TRWCADRSIL LSRVSTGRRT LEDVFLDLTG
RSLR