Gene Sked_21720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_21720 
Symbol 
ID8633807 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp2419535 
End bp2420407 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content77% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003314926 
Protein GI269795471 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.477257 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCTCGC ACGCCTCGCG CCCCACCCGT CCCGACCCGG GGGCGATCGT CCCCCGCTCC 
GCCTCGCTCG CTCTGTGGTT GTGGGCCACG GTGCGGCCCG ACGACGCGCC CGCCGCGGTG
CGGACCGTCG TCGACGACGA CGAGCCGCAC CGGCTGGTCG AGGTGCCGCC GGACGGGCTG
CCGGCCGCGG ACCTCGAGGA GCTCTTCTCG GTGTGGGCGG GCCGCGTGCG GTCCGCCGCG
GCGATCTTCC CCGGTCCGGG TGACGCGATG GGGGCTCCGG CGCCGATCAG CCCGATCGCG
ATCGACGCCG AGGAGTGCGT GCTCGTGACG GTCGCGGCCG GGCCGCAGGC GCCGGGTGCC
GGCGTGGTGC CTCCCGGGCC GGACGCGCCG GAGGTCTTGG AGCACTGGGC CCTGGTGCCC
GAGGTCGAGC GCTTCGGCTC GGTCCTCGAG CCCGGGCACC TCGTCACGTG GACGGTGGCC
CGGATCGAGA CGTGGGAGCA CCGCACACTC GGGGTGGTCG GCACGCTCGA CGACGCGCAG
CGCCAGCTGC GCCTGGGGCT GCGCGAGGCG ACCGAGGCCC TCATGGAGCT GGACGTCTCG
CGCTGGCGGG AGGACGCCGC CGGTGTCATC GCGTCGCTGC GCGAGCCCGT CGACCTCCGG
TCGGTGCTGC CGCGGGACGT CGACGCCCGC CGGGCCGAGG TGTTCCAGTC GGCCGCGCGG
CTGCGCGCCA TCGTGGACCT CGCGACGGCG GACGACGGCG GCGCGGTCAA CCTGTGGCAG
GCCGACCAGC GCTCGACCGC CCTGCGCGAG GTCGACCGTG CGGCACGCCG CGCGATGTCC
GCCGCCACCC TGCACGTCCC CGACGGAGCC TGA
 
Protein sequence
MTSHASRPTR PDPGAIVPRS ASLALWLWAT VRPDDAPAAV RTVVDDDEPH RLVEVPPDGL 
PAADLEELFS VWAGRVRSAA AIFPGPGDAM GAPAPISPIA IDAEECVLVT VAAGPQAPGA
GVVPPGPDAP EVLEHWALVP EVERFGSVLE PGHLVTWTVA RIETWEHRTL GVVGTLDDAQ
RQLRLGLREA TEALMELDVS RWREDAAGVI ASLREPVDLR SVLPRDVDAR RAEVFQSAAR
LRAIVDLATA DDGGAVNLWQ ADQRSTALRE VDRAARRAMS AATLHVPDGA