Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_21550 |
Symbol | |
ID | 8633790 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | + |
Start bp | 2402968 |
End bp | 2403753 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | ABC-2 type transporter |
Protein accession | YP_003314909 |
Protein GI | 269795454 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.996492 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGAGCC GTGGACCTGT CGGGACGTCG CTGCGGATCG CTCGTGTGTC GACCCCGGAG CTGACGACCG CGTCGACCGC GCTCACGTCC CTCGTCGCCG TGCCGCTGCT CGAGGTGCTC CTCATCGTCG CCGTCTCGGC GTCTCTGGGT GGTGACGACC TCGTCCGCAC CGCCTACGCG GCGATCATCC TCGCCTACGG GCTGAGCATC ATCACCGGGA CCGTCGGGCA GGTCACGAGG GACCGGCAGA TCGGGGTGCT GCAAGAGGCT CTCATGTCAC GGTTCTTCTA CCTGCCGTAC TGGTTGGGCA AGGTCACCGT ACCGGCGGTC CTCGGGGCTG CGGTCGCTGT GGCATCCAGC CTCGCGGTGC TGCTCGTCGA CCCTGAACGC TCCGCGCAGG CCTTCGTCGG CACGGTCGCC CTGCTGCCTG TCGTCACCGT CGGAGCCAGC CTGGCTGCCG TCGGGGTCGC GACGCTCTCT GTGGGCGCCA GCGATCCGTA CCTCGTGGCG AACGTCGCTC AAGGGGTCCT GCCGCTGACC GCTGGGGTGG TCGTGCCGCT GTCGTCCTAT CCGGCGGTGC TCGCGCACGC AGCGTCGGCG CTCCCGTTCA CCGCGGCCGT CGAGGCGATG CGGGTCCTCC AGGACGGCGG GGACGCCGCC CTGGTCGCGA CACTCATGAC CAGGGAGCTG CTCGTGTGCG CGGTCTGGTT CGTGGTCGGT GCCGTCGTCA GCAGACGGGT CGTGCGCGCG CTGCGCGACG GACGTCGTCG AGAGGAGATC TGGTGA
|
Protein sequence | MTSRGPVGTS LRIARVSTPE LTTASTALTS LVAVPLLEVL LIVAVSASLG GDDLVRTAYA AIILAYGLSI ITGTVGQVTR DRQIGVLQEA LMSRFFYLPY WLGKVTVPAV LGAAVAVASS LAVLLVDPER SAQAFVGTVA LLPVVTVGAS LAAVGVATLS VGASDPYLVA NVAQGVLPLT AGVVVPLSSY PAVLAHAASA LPFTAAVEAM RVLQDGGDAA LVATLMTREL LVCAVWFVVG AVVSRRVVRA LRDGRRREEI W
|
| |