Gene Sked_21550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_21550 
Symbol 
ID8633790 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp2402968 
End bp2403753 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content70% 
IMG OID 
ProductABC-2 type transporter 
Protein accessionYP_003314909 
Protein GI269795454 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.996492 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAGCC GTGGACCTGT CGGGACGTCG CTGCGGATCG CTCGTGTGTC GACCCCGGAG 
CTGACGACCG CGTCGACCGC GCTCACGTCC CTCGTCGCCG TGCCGCTGCT CGAGGTGCTC
CTCATCGTCG CCGTCTCGGC GTCTCTGGGT GGTGACGACC TCGTCCGCAC CGCCTACGCG
GCGATCATCC TCGCCTACGG GCTGAGCATC ATCACCGGGA CCGTCGGGCA GGTCACGAGG
GACCGGCAGA TCGGGGTGCT GCAAGAGGCT CTCATGTCAC GGTTCTTCTA CCTGCCGTAC
TGGTTGGGCA AGGTCACCGT ACCGGCGGTC CTCGGGGCTG CGGTCGCTGT GGCATCCAGC
CTCGCGGTGC TGCTCGTCGA CCCTGAACGC TCCGCGCAGG CCTTCGTCGG CACGGTCGCC
CTGCTGCCTG TCGTCACCGT CGGAGCCAGC CTGGCTGCCG TCGGGGTCGC GACGCTCTCT
GTGGGCGCCA GCGATCCGTA CCTCGTGGCG AACGTCGCTC AAGGGGTCCT GCCGCTGACC
GCTGGGGTGG TCGTGCCGCT GTCGTCCTAT CCGGCGGTGC TCGCGCACGC AGCGTCGGCG
CTCCCGTTCA CCGCGGCCGT CGAGGCGATG CGGGTCCTCC AGGACGGCGG GGACGCCGCC
CTGGTCGCGA CACTCATGAC CAGGGAGCTG CTCGTGTGCG CGGTCTGGTT CGTGGTCGGT
GCCGTCGTCA GCAGACGGGT CGTGCGCGCG CTGCGCGACG GACGTCGTCG AGAGGAGATC
TGGTGA
 
Protein sequence
MTSRGPVGTS LRIARVSTPE LTTASTALTS LVAVPLLEVL LIVAVSASLG GDDLVRTAYA 
AIILAYGLSI ITGTVGQVTR DRQIGVLQEA LMSRFFYLPY WLGKVTVPAV LGAAVAVASS
LAVLLVDPER SAQAFVGTVA LLPVVTVGAS LAAVGVATLS VGASDPYLVA NVAQGVLPLT
AGVVVPLSSY PAVLAHAASA LPFTAAVEAM RVLQDGGDAA LVATLMTREL LVCAVWFVVG
AVVSRRVVRA LRDGRRREEI W