Gene Sked_21530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_21530 
Symbol 
ID8633788 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp2401255 
End bp2402217 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content71% 
IMG OID 
ProductABC-type multidrug transport system, ATPase component 
Protein accessionYP_003314907 
Protein GI269795452 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGTTC CAGCTCTCGA GGCCCACCAC CTGCGGCGAG AGTTCGGCCC GGGCCGGCAC 
GTCGCCGTGG ACGACGTCAG CCTCCGGATC GACGCCGGGG AGGTGCTCTG CCTGCTGGGG
CCGAACGGCG CCGGCAAGAC GACCACGGTC AAGATGATCT CGACCCTCCT CTCCCCCACG
TCTGGCGGTG TGGTCATCGA CGGTGTCGAC GCCGTCGCGT CACCCGCTGA GGCACGGTCG
CGTCTCGGCC TGGTGCTCGG GGGCGAGCGC GGCTTCTACC TGCGGGCGAG CGCACGCGAC
AACCTGCTCT TCTTCGCGGA CGTGCTCGGT GTGCGTCGTG GAGACCGCGA GCGCCGCGTC
CGGGACGCCC TCGACGCCGT CGCCCTCGTG GACCGGGCTG ACGACGCGGT CGACGCCTTC
TCCCGAGGGA TGCGCCAGCG TCTGCACATC GCCCGAGGGC TGCTCAACGC GCCACGGCTG
CTGCTTCTCG ACGAGCCGAC CAACGGCCTA GACCCGGAGA TCGCCCGCGA CATCCGGGAC
CTGGTCAAGC ACCTGGCCGC CCAGGGCACC GGCATCCTGC TCACCACCCA CTATCTGGCC
GAGGCCGAGC AGCTGGCGAC GTCCCTCGCA CTCATCATGT CCGGGAAGAT CGTCATCGAG
GGAGACGTGG CGGATGTCGT CGCCCGGTCA GGCGTGACGA CCGTGACCAC GTTGTCCGTG
GACGTGCTGA CCGACGCCGA CCTCGACCGG ATCGCCGCGA TCGGCGGTCT GGGAACCGTG
ACGACCGACG TCCGTGACGG CCGCACGCAC CTCCGTCTGC CGTGGACCGG TGAGCCTGCC
CTGGACAGGC TCACCGGCGA GCTCGTCGAG ATTCACGGGG CGGTCCCGCC AGACCTCGTG
ACCCGTCGGG CGACCCTGGA GGAGAGCTAC CTCGCTCTCG TGACCGTCGG GCAGCCCGGC
TGA
 
Protein sequence
MSVPALEAHH LRREFGPGRH VAVDDVSLRI DAGEVLCLLG PNGAGKTTTV KMISTLLSPT 
SGGVVIDGVD AVASPAEARS RLGLVLGGER GFYLRASARD NLLFFADVLG VRRGDRERRV
RDALDAVALV DRADDAVDAF SRGMRQRLHI ARGLLNAPRL LLLDEPTNGL DPEIARDIRD
LVKHLAAQGT GILLTTHYLA EAEQLATSLA LIMSGKIVIE GDVADVVARS GVTTVTTLSV
DVLTDADLDR IAAIGGLGTV TTDVRDGRTH LRLPWTGEPA LDRLTGELVE IHGAVPPDLV
TRRATLEESY LALVTVGQPG