| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_21460 |
|---|
| Symbol | |
|---|
| ID | 8633781 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | - |
|---|
| Start bp | 2392702 |
|---|
| End bp | 2394459 |
|---|
| Gene Length | 1758 bp |
|---|
| Protein Length | 585 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | putative p-aminobenzoyl-glutamate transporter |
|---|
| Protein accession | YP_003314900 |
|---|
| Protein GI | 269795445 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.302884 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCAAGA AGCCGAAGAG CCCCGAGGGC TCCAGGGGTG CCGGGGGCAC CGAGACCGCC
GTCGCGAAGA CGACGGTCCT GCAACGGTCC CTCGACGCGA TCGAGCGGGC CGGCAACAAG
GTGCCGCACC CGGCCGTGAT CTTCGTCGGG CTCATCCTCC TGGTGATCGT GCTGTCGCAC
GTGTTCTACC TCGCCGGCAC CTCGGTGACC TTCGACCAGG CGTACGTCAG CGAGCAGGTG
ACGCCGAGCG GCGAAGAGCT CGTCGGGGAC GAGGCGCTGC AGAGCGAGGA CCCGCAGGTC
GAGCAGGTGA CCGTGGGCGT CGAGTCGCTG CTGAGCGCCG ACGGCATCCG GTTCCTGTTC
ACCTCGGCCG TCGACAACTT CAACGGCTTC GGCGTGGTCG GCGTCATCCT CGTCGCCATG
ATCGGTGTGG GTCTCGCCGA GGAGGCCGGG CTGATCGGCG CCTTCATCAA GCGCCTCGTG
AAGATCACGC CGTCGCGCTT CATCACGCTC ATCGTCGTGT TCCTCGGGGT GCTGTCCTCG
ATCGCGACGG ACGCCGGCTA CCTCGTGCTC ATCCCGCTCG CCGCAGCGGT CTTCCACTCG
CTCGGGCGGC ACCCGCTGGC CGGGCTCGCC GCGGCCTTCG CCGGTGTCGG TGGCGGGTTC
GGCGTCAACC TGCTCATCAC GCCCATCGAC GGGATGCTCA CCGAGATCAC CAACGAGGCG
ATCGCCGACC CCGCCCAGCA CGTCTCGATC ACCGGCAACC TGTACTTCGC GATCGTCTCG
ACCGTCGTCG TCACCCTCGT CGCGACGCTC GTGACGGAGA AGTTCGTCGA GCCGCGCCTG
GGGACCTACC GGGAGGACGA GGCGCCCGCG CCGCTCGGCA CCGCTGCCAC GCCCGGACCG
GACGACCGGG GTGTCTCGGT GGCAGAGCCC GGGGGAGAAG GCACGACGAC GATCGCGGCG
GCAGGCACCG CACCGCAGGC CGCGGGAGAT CTCACCGCAG CAGAGCGTCG CGGGCTGCGG
TGGTCTGGGT ACGGCCTCGC CGGGGTGACG GCCGCCGTCC TGCTCCTCGC GCTGCCGTCC
TGGGGGCCGC TGCGCAACCC CGAGACCGGG AGCCTCGTCG AGGGCTCGCC GCTCATGGGC
AGCATCATCG TGCTGATCTT CGTCTACTTC TTCATCATGG GGCTCTGCTA CGGCCGCGGT
GCCGGGACCA TCCGCACGAC CACCGACGTC ATCGACCCCA TGGTCAAGAC CGTCGCCGGG
CTCTCCGGGC TGATCTTCCT CCTGCTCGTC ATCAGCCAGT TCATCGCGTA CTTCAACTAC
TCCAACCTCG GCACCGTCGC CGCGGTGGGC ATGGCCGACG CGCTCGAGCA GGCGAACCTC
GGCACCGTGC CGCTCATCAT CGGGCTCGTC GCCATGACCG CGGTGATCGA CATCTTCATC
GGCGGGGTGG TCCCCAAGTG GGCGATCTTC GCCCCGATCT TCGTGCCGCT GTTCATCCAG
CTCGGCATCT CCCCGAACCT CGCGGTTGCC GCGTACAGGG TCGGGGACTC CCCGATCAAC
GTCGCGACGC CGCTCATGCC GTACTTCGCG CTCATCGTCA TCTTCGCCGA GAAGTACCGC
CGGAAGGTGG GTGTGGGGTC GATCATCTCG CTCATGCTCC CGTACACCGT CGCGCTGCTC
GTCGTGTGGA CCGCGCTGCT GATCGGCTGG TACCTGCTCG GGCTGCCGCT GGGACCCGGC
GCGGACGTCT ACCTCTGA
|
|---|
| Protein sequence | MGKKPKSPEG SRGAGGTETA VAKTTVLQRS LDAIERAGNK VPHPAVIFVG LILLVIVLSH
VFYLAGTSVT FDQAYVSEQV TPSGEELVGD EALQSEDPQV EQVTVGVESL LSADGIRFLF
TSAVDNFNGF GVVGVILVAM IGVGLAEEAG LIGAFIKRLV KITPSRFITL IVVFLGVLSS
IATDAGYLVL IPLAAAVFHS LGRHPLAGLA AAFAGVGGGF GVNLLITPID GMLTEITNEA
IADPAQHVSI TGNLYFAIVS TVVVTLVATL VTEKFVEPRL GTYREDEAPA PLGTAATPGP
DDRGVSVAEP GGEGTTTIAA AGTAPQAAGD LTAAERRGLR WSGYGLAGVT AAVLLLALPS
WGPLRNPETG SLVEGSPLMG SIIVLIFVYF FIMGLCYGRG AGTIRTTTDV IDPMVKTVAG
LSGLIFLLLV ISQFIAYFNY SNLGTVAAVG MADALEQANL GTVPLIIGLV AMTAVIDIFI
GGVVPKWAIF APIFVPLFIQ LGISPNLAVA AYRVGDSPIN VATPLMPYFA LIVIFAEKYR
RKVGVGSIIS LMLPYTVALL VVWTALLIGW YLLGLPLGPG ADVYL
|
|---|
| |