| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_21310 |
|---|
| Symbol | |
|---|
| ID | 8633766 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | - |
|---|
| Start bp | 2380431 |
|---|
| End bp | 2381468 |
|---|
| Gene Length | 1038 bp |
|---|
| Protein Length | 345 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | |
|---|
| Product | phosphoglycerate dehydrogenase-like oxidoreductase |
|---|
| Protein accession | YP_003314885 |
|---|
| Protein GI | 269795430 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00161696 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.173916 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCACGC CCCGGCACAC CCAGCCCCCG CGACGCCCCC GCACCATGGC CCTCATGGCG
CCCGACGTCT TCGAGCAGCA GCTCGACGCC GTGCGCCTCG ACCGCCTCGC CGGGCTCGCG
ACCCTCACCG ACCTCGTGTG GACCGACACC GTCGACACCC CCGACGTCCG CGAGCGCGCC
CGCGACGTCG AGGTGCTCCT CACCTCCTGG GGCGCACCCC GCCTCACCGC GGAGCGTCTC
GACCACCTGC CCGCGCTGCG GGCGGTGGTG CACTGCGCGG GCAGCGTCCG CGGTCTCGTG
AGCGACGCGC TCTGGGACCG CGGCATCCAG GTGACGACGG CCGCCGACGC CAACGCCATC
CCGGTCGCGG AGTTCACGGT CGCCGCGGTG GTCCTGGCGA GCAAGAAGGC CCCTGTGCTG
AGCGCCCTGG CACGTGAGCA CCGCGAGGAC TGGTCGTACC GCGGCACGGT CGGGCCCACG
AGCACCTTCG GCCTGACGGT CGGGGTCGTC GGGTTCTCCC GGGTCGGGCG TCGCGTCGTC
GAGGGGCTGC GGGCGCTCGA GGAGTGCACC GTCCTCGTGG TCGACCCCTA CGCCGACCCC
GCCGAGGTGG CCGCGGTCGG CGGGCGGCTC GTGAGCCTCG CGCAGATGCT CCCGCAGGTC
GACGTGCTCT CGCTCCACGC GCCGTCGGTC CCCGCGACGG ACCGGATGAT CGGTGCGGCC
GAGCTCGCGG CCCTCCCGGA CCACGCGACC CTGGTCAACA CGGCCCGCGG CAGCCTCGTC
GACCATGACG CCCTCGCCCG CGAGTGCCGC ACGGGGCGCC TGCACGCGAT CCTTGACGTC
ACCGACCCGG AGCCGCTGCC CGCGGGCTCG GCCCTCTACG GGCTGCCCAA CGTCATGCTC
ACCCCGCACG TCGCCGGGTC GCTGGGCACG GAGACCCTCC GGATGACCGC GAGCGCCCTC
GACCAGCTCG AGCTCTACGC GTCCGGTCGC CCGCTCACCG CGGCCATGAC GCGCGAGCGT
CTGGAGGTCA GCGCGTGA
|
|---|
| Protein sequence | MTTPRHTQPP RRPRTMALMA PDVFEQQLDA VRLDRLAGLA TLTDLVWTDT VDTPDVRERA
RDVEVLLTSW GAPRLTAERL DHLPALRAVV HCAGSVRGLV SDALWDRGIQ VTTAADANAI
PVAEFTVAAV VLASKKAPVL SALAREHRED WSYRGTVGPT STFGLTVGVV GFSRVGRRVV
EGLRALEECT VLVVDPYADP AEVAAVGGRL VSLAQMLPQV DVLSLHAPSV PATDRMIGAA
ELAALPDHAT LVNTARGSLV DHDALARECR TGRLHAILDV TDPEPLPAGS ALYGLPNVML
TPHVAGSLGT ETLRMTASAL DQLELYASGR PLTAAMTRER LEVSA
|
|---|
| |