Gene Sked_21300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_21300 
Symbol 
ID8633765 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp2378374 
End bp2380434 
Gene Length2061 bp 
Protein Length686 aa 
Translation table11 
GC content77% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003314884 
Protein GI269795429 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00049361 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0951382 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCCGGC CCGGCGTCCC CGGCCGTGGG ACCCTGCTCG GTCGCGTCCC CGCGGACCAC 
GCTCTCTCGC CGTGCACGGG GTGGACGCGG GCGCACTGGG CGGCGCTCGC GGACGACCTG
CTGCTGTCGA CGCGTCCGTT CACGAGCCCG GACGGCTCGC ACGTCGACCT GCCGGGCCGC
ACCGGTGGGT ACGGGCGGGA CGTGGACGGT CTCGAGGGCT TCGCCCGGAC CTTCATGCTG
GCGGCCTTCC GGCTGGCGGG GGAGCGGGGG CACGACCCGC TCGACCTCGC GGGGCGGTAC
GCGGCGGGCT TCGCGGCCGG CACCGACCCG ACCTCGCCGC GGCGCTGGAC GCGCCCGGAC
GAGCACGGCC AGGCGAAGGT CGAGGCCGCG GCCCTCGCGA TCGGGCTGGA CATGACCCGG
CCGTGGATCT GGGACCGCAT GAGCCCGACC GTGCAGCAGC AGGTGGTCGA CTACCTCGCG
ACGGTGGTGG GCGGGGAGTA CCCGCAGACC AACTGGGTGT GGTTCCGCAT CGTCGTCGAG
ACCTTCCTGC GGTCGGTGGG CGGCCCGTAC TCATCGGAGG ACGTCGAGTC CGACCTGGCG
GCCCACGACA CCTTCGTCCG GGAGGGCGGC TGGTACGCGG ACGGGCCCGA GCGCAGCTTC
GACCACTACA CGGGCTGGGC GCTGCACCTG TACCCGGTGC TGTGGGCCCG GATGGCCCCG
GACGACCCGC TCGTGGTGGC CCGGCGCCCG CGCCTGGACG CGCACCTCGA CGACTACCTG
CGGCAGGCGG TGGCGCTGGT CGGTGCGGAC GGCGCCCCGC TGTTCCAGGG CCGCAGCCTC
GTGTACAGGT TCGCGGCGGC GGCGCCGTTC TGGGCGGGGG CGCTCGCCGG GTCGTCGGTG
CTGACGCCCG GGCAGGTGCG GCGCGCCGCG TCGGGGGTCG TCCGTCACTT CACCGAGCAC
GGTGTGCCCG ACGAGCGCGG GCTGCTGACG CTCGGCTGGC ACGGCGCGTG GCCCGACCTC
GCGCAGCACT ACTCGGGGAC GGGGTCGCCC TACTGGGCCT CCAAGGGGCT GCTGGGGCTC
GCACTGCCCG CCGACCACCC GGTGTGGACG GCCGTCGAGG AGTTGCTCCC GGTCGAGCGG
GGAGACGTGC TCGCCGTGGC CCCGGCACCT GGCTGGCTGG TCTCGGGGAC CCGCGACGAC
GGCATCGTCC GGGTGGTCAA CCACGGCACG GACCATGCGC TGCCGGGGGA CGACGTGAGC
GACTCCCCGC TGTACGCGAG GCTCGGGTAC TCGACCGTCA CCTCGCCCGT CATGGGGCGG
CGCGGCTGGA CGGACCCGGT CGACCAGTCC GTCGCGCTCG TCGGGCCGGA CGGCAGGCTG
AGCCACCGGT CGGGCTTCGA GGCGCTGAGC GCGGGGACGG TGCGGCTCGA GGGTGGCGCA
GGGACGGCGC CGTCCACCGC CGACACCGTC GGCACCGTCG CCGCCGTCGG GTTCTCCCGG
GGGCGTGCGC ACTGGGTGCA CCCGGCCGGC GAGGTCCTCG ACTACGGCTC GGGCCACCGG
GGCGACGTGA CCTGGGGGCC GTGGGTGACC ACCGGGTCGG TGGTCCGCGG CGCCTGGGAG
GTGCGCCTGG TGCGGGTCGC TCCAGCCGAG GGGGCGACGA GCGGCAGGCT CCGGGTCGCC
GGGTGGGCCG TGTCGGGCGA CCGGGCGCCG GTCCCGGTCG TCGACGGGGC GTCGACCCTG
GTGAGCGCCC GGGCGTCGAC GCCGACCCTC GTCTCCTCGG TCCGGGCCGC GGTCGGCGAG
CTGGTGCCCG GCGTGGACGT CGAGCACGAC GCCACGGCAC TGGGGGCCTG CACCGCGGTG
CCGTGGCTGA CCACGGCGGG GGAGCCCGGC GAGGACTGGT ACGCGGTGGT CGTCCGGCTG
GCCGGAGCCA CGGTCGACCC GGGGCCGACG CCGCGGGTCC GCGTCGAGGA GGACGTGGTC
CACGTGACCT GGGGCGACGG TCTGCGGTGC CGCGCGGAGC TGCCCGGCGA CGGTGCGCGG
GGGGACCGCC TCGACGGGTG A
 
Protein sequence
MSRPGVPGRG TLLGRVPADH ALSPCTGWTR AHWAALADDL LLSTRPFTSP DGSHVDLPGR 
TGGYGRDVDG LEGFARTFML AAFRLAGERG HDPLDLAGRY AAGFAAGTDP TSPRRWTRPD
EHGQAKVEAA ALAIGLDMTR PWIWDRMSPT VQQQVVDYLA TVVGGEYPQT NWVWFRIVVE
TFLRSVGGPY SSEDVESDLA AHDTFVREGG WYADGPERSF DHYTGWALHL YPVLWARMAP
DDPLVVARRP RLDAHLDDYL RQAVALVGAD GAPLFQGRSL VYRFAAAAPF WAGALAGSSV
LTPGQVRRAA SGVVRHFTEH GVPDERGLLT LGWHGAWPDL AQHYSGTGSP YWASKGLLGL
ALPADHPVWT AVEELLPVER GDVLAVAPAP GWLVSGTRDD GIVRVVNHGT DHALPGDDVS
DSPLYARLGY STVTSPVMGR RGWTDPVDQS VALVGPDGRL SHRSGFEALS AGTVRLEGGA
GTAPSTADTV GTVAAVGFSR GRAHWVHPAG EVLDYGSGHR GDVTWGPWVT TGSVVRGAWE
VRLVRVAPAE GATSGRLRVA GWAVSGDRAP VPVVDGASTL VSARASTPTL VSSVRAAVGE
LVPGVDVEHD ATALGACTAV PWLTTAGEPG EDWYAVVVRL AGATVDPGPT PRVRVEEDVV
HVTWGDGLRC RAELPGDGAR GDRLDG