Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_21300 |
Symbol | |
ID | 8633765 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | - |
Start bp | 2378374 |
End bp | 2380434 |
Gene Length | 2061 bp |
Protein Length | 686 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003314884 |
Protein GI | 269795429 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00049361 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.0951382 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCCGGC CCGGCGTCCC CGGCCGTGGG ACCCTGCTCG GTCGCGTCCC CGCGGACCAC GCTCTCTCGC CGTGCACGGG GTGGACGCGG GCGCACTGGG CGGCGCTCGC GGACGACCTG CTGCTGTCGA CGCGTCCGTT CACGAGCCCG GACGGCTCGC ACGTCGACCT GCCGGGCCGC ACCGGTGGGT ACGGGCGGGA CGTGGACGGT CTCGAGGGCT TCGCCCGGAC CTTCATGCTG GCGGCCTTCC GGCTGGCGGG GGAGCGGGGG CACGACCCGC TCGACCTCGC GGGGCGGTAC GCGGCGGGCT TCGCGGCCGG CACCGACCCG ACCTCGCCGC GGCGCTGGAC GCGCCCGGAC GAGCACGGCC AGGCGAAGGT CGAGGCCGCG GCCCTCGCGA TCGGGCTGGA CATGACCCGG CCGTGGATCT GGGACCGCAT GAGCCCGACC GTGCAGCAGC AGGTGGTCGA CTACCTCGCG ACGGTGGTGG GCGGGGAGTA CCCGCAGACC AACTGGGTGT GGTTCCGCAT CGTCGTCGAG ACCTTCCTGC GGTCGGTGGG CGGCCCGTAC TCATCGGAGG ACGTCGAGTC CGACCTGGCG GCCCACGACA CCTTCGTCCG GGAGGGCGGC TGGTACGCGG ACGGGCCCGA GCGCAGCTTC GACCACTACA CGGGCTGGGC GCTGCACCTG TACCCGGTGC TGTGGGCCCG GATGGCCCCG GACGACCCGC TCGTGGTGGC CCGGCGCCCG CGCCTGGACG CGCACCTCGA CGACTACCTG CGGCAGGCGG TGGCGCTGGT CGGTGCGGAC GGCGCCCCGC TGTTCCAGGG CCGCAGCCTC GTGTACAGGT TCGCGGCGGC GGCGCCGTTC TGGGCGGGGG CGCTCGCCGG GTCGTCGGTG CTGACGCCCG GGCAGGTGCG GCGCGCCGCG TCGGGGGTCG TCCGTCACTT CACCGAGCAC GGTGTGCCCG ACGAGCGCGG GCTGCTGACG CTCGGCTGGC ACGGCGCGTG GCCCGACCTC GCGCAGCACT ACTCGGGGAC GGGGTCGCCC TACTGGGCCT CCAAGGGGCT GCTGGGGCTC GCACTGCCCG CCGACCACCC GGTGTGGACG GCCGTCGAGG AGTTGCTCCC GGTCGAGCGG GGAGACGTGC TCGCCGTGGC CCCGGCACCT GGCTGGCTGG TCTCGGGGAC CCGCGACGAC GGCATCGTCC GGGTGGTCAA CCACGGCACG GACCATGCGC TGCCGGGGGA CGACGTGAGC GACTCCCCGC TGTACGCGAG GCTCGGGTAC TCGACCGTCA CCTCGCCCGT CATGGGGCGG CGCGGCTGGA CGGACCCGGT CGACCAGTCC GTCGCGCTCG TCGGGCCGGA CGGCAGGCTG AGCCACCGGT CGGGCTTCGA GGCGCTGAGC GCGGGGACGG TGCGGCTCGA GGGTGGCGCA GGGACGGCGC CGTCCACCGC CGACACCGTC GGCACCGTCG CCGCCGTCGG GTTCTCCCGG GGGCGTGCGC ACTGGGTGCA CCCGGCCGGC GAGGTCCTCG ACTACGGCTC GGGCCACCGG GGCGACGTGA CCTGGGGGCC GTGGGTGACC ACCGGGTCGG TGGTCCGCGG CGCCTGGGAG GTGCGCCTGG TGCGGGTCGC TCCAGCCGAG GGGGCGACGA GCGGCAGGCT CCGGGTCGCC GGGTGGGCCG TGTCGGGCGA CCGGGCGCCG GTCCCGGTCG TCGACGGGGC GTCGACCCTG GTGAGCGCCC GGGCGTCGAC GCCGACCCTC GTCTCCTCGG TCCGGGCCGC GGTCGGCGAG CTGGTGCCCG GCGTGGACGT CGAGCACGAC GCCACGGCAC TGGGGGCCTG CACCGCGGTG CCGTGGCTGA CCACGGCGGG GGAGCCCGGC GAGGACTGGT ACGCGGTGGT CGTCCGGCTG GCCGGAGCCA CGGTCGACCC GGGGCCGACG CCGCGGGTCC GCGTCGAGGA GGACGTGGTC CACGTGACCT GGGGCGACGG TCTGCGGTGC CGCGCGGAGC TGCCCGGCGA CGGTGCGCGG GGGGACCGCC TCGACGGGTG A
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Protein sequence | MSRPGVPGRG TLLGRVPADH ALSPCTGWTR AHWAALADDL LLSTRPFTSP DGSHVDLPGR TGGYGRDVDG LEGFARTFML AAFRLAGERG HDPLDLAGRY AAGFAAGTDP TSPRRWTRPD EHGQAKVEAA ALAIGLDMTR PWIWDRMSPT VQQQVVDYLA TVVGGEYPQT NWVWFRIVVE TFLRSVGGPY SSEDVESDLA AHDTFVREGG WYADGPERSF DHYTGWALHL YPVLWARMAP DDPLVVARRP RLDAHLDDYL RQAVALVGAD GAPLFQGRSL VYRFAAAAPF WAGALAGSSV LTPGQVRRAA SGVVRHFTEH GVPDERGLLT LGWHGAWPDL AQHYSGTGSP YWASKGLLGL ALPADHPVWT AVEELLPVER GDVLAVAPAP GWLVSGTRDD GIVRVVNHGT DHALPGDDVS DSPLYARLGY STVTSPVMGR RGWTDPVDQS VALVGPDGRL SHRSGFEALS AGTVRLEGGA GTAPSTADTV GTVAAVGFSR GRAHWVHPAG EVLDYGSGHR GDVTWGPWVT TGSVVRGAWE VRLVRVAPAE GATSGRLRVA GWAVSGDRAP VPVVDGASTL VSARASTPTL VSSVRAAVGE LVPGVDVEHD ATALGACTAV PWLTTAGEPG EDWYAVVVRL AGATVDPGPT PRVRVEEDVV HVTWGDGLRC RAELPGDGAR GDRLDG
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