Gene Sked_21290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_21290 
Symbol 
ID8633764 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp2377139 
End bp2378248 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content78% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003314883 
Protein GI269795428 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000179213 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0805722 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGCCC GACCTACCGC GCACCTCGAG GGCGCTGCCA CCACCGCGCA CCCTGACGAC 
GACGCCCGTC CTGACGAGGT CACCAGCACC CCCGAGGCGG CGCGCACCGA CCCTGCCGCG
CGCGCCGCGC GAGCCCGTGA GGCGCTGCGC GCAGCCGAGC AGCGCACCGG CGCACGGTCC
CTCAGCGTCG TGCCGGCCGC CGAGGTCGCG ACCACCCTCG GCTCCGTCGA CGCCGCACGC
TCCGCCGTGC GCTCCGCGCC TTCGAGCCCG ACCCTCTCCA GCCCAGCCCA GCTGGCGCTG
ACGGACCAGC CGGACCTGAG GGCACAGCCG ACCGCGCCGG TCCCGTCAGC CCAGCCCGCT
CCACCAGACC GACCGGTGCC GCTCCAGGCG GTCGACACGA TCATCAGCAC CGAGCGCCCA
CCCCTGCCCG TCCCCGCCGA GCTCGCACCG CTCCTGCCCG CAGGGCTGCG CCGCGGCATC
ACCGTCCAGG TCGACGGGTC GACCTCCGTG CTCCTCGCGC TCCTCTCCGA GGCGTCCCGC
GCCGGCTCCT GGGCAGCCGT GGTCGGCGCC CCCAGCATCG GCCTGCTCGC CGTCGCCCAG
GCCGGCATCG ACCTCAGCCG CCTCGTCCTC GTCCCCGCCC CGGGCGCGCA GGCCGCCCCG
GCGCTCGCGG CCCTGCTCGA CGGCATGGAC GTGGTGGTCG TCGGCCCCGA GGTCTCGCTC
CTCGGAGCCG ACCGCCGCAG GCTCGTCGCG CGGGCCCGGG AGCGGGCGAG CGTCATCGTC
TCCCTGCGCC CGTGGCCCGG CGCGCACATG ACCCTCGCCG CCGAGCGCAG CCGCTGGGCC
GGGCTCGGGG CCGGTCGCGG TCGGCTGAGC AGCCGGGAGA TGACCGTCAC CCGCACCGAC
CGCGCCCACG GGACCACGTA CCGCCACACG GTCACGCTGC CCTTCGCCCG TCCGACGGTC
GCAGCCCCCG GCGTGGCAGC ACCCGCACCT GTCGCCGCAC CCGTACCGGT CACCGCGGCC
GTACCGGTCA CCGCGGCCGT GCCGGTCGAG ACACCGGCCG CCGTCGCCAC GGTGCACGTC
ACCCAGCCGA CGCTCGCGCA GGTGGGCTGA
 
Protein sequence
MHARPTAHLE GAATTAHPDD DARPDEVTST PEAARTDPAA RAARAREALR AAEQRTGARS 
LSVVPAAEVA TTLGSVDAAR SAVRSAPSSP TLSSPAQLAL TDQPDLRAQP TAPVPSAQPA
PPDRPVPLQA VDTIISTERP PLPVPAELAP LLPAGLRRGI TVQVDGSTSV LLALLSEASR
AGSWAAVVGA PSIGLLAVAQ AGIDLSRLVL VPAPGAQAAP ALAALLDGMD VVVVGPEVSL
LGADRRRLVA RARERASVIV SLRPWPGAHM TLAAERSRWA GLGAGRGRLS SREMTVTRTD
RAHGTTYRHT VTLPFARPTV AAPGVAAPAP VAAPVPVTAA VPVTAAVPVE TPAAVATVHV
TQPTLAQVG