| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_21270 |
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| Symbol | |
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| ID | 8633762 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sanguibacter keddieii DSM 10542 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013521 |
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| Strand | - |
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| Start bp | 2372055 |
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| End bp | 2375408 |
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| Gene Length | 3354 bp |
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| Protein Length | 1117 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | |
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| Product | DNA polymerase III, alpha subunit |
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| Protein accession | YP_003314881 |
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| Protein GI | 269795426 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0292605 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.169671 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGACC GCACCCGTAC CGCAGCCCGG CCCGAGTACG CCGAGCTGCA CGCCCACAGC
GCCTTCAGCT TCCTCGACGG TGCCAACCAG CCCGAGGAGC TCGCCGCCGA GGCGTACCGC
CTCGGGCTGA CCGCCCTGGC CCTCACCGAC CACGACGGCC TCTACGGCGT CGTGCGCTTC
GCCGAGGCCG CACGCCAGCT CGGGCTGCCG ACGATCTTCG GCGCCGAGCT CCACCTGCCC
GACGCCGTCG GCACCCTCGA CGCGCCCACC GGCGTCCCCG ACCCCCGCTC CGAGCACCTG
CTCGTGCTGG CCCGCGGGCC GCAGGGCTAC CGCAACCTGT CGTCGGCGAT CGCCGAGGGC
CACCTGTCGA CAGGGCGCAA GGGCGCCGCC GACCACAGCC TCGAGGAGCT CGGCGCCCGC
GCCGACGGGC AGTGGCTCGT GCTCACCGGG TGCCGCAAGG GTGCGGTGCG CAGCGCCCTG
GGGTCGGGGC CCACCTGGGA CCCGCGGGGC GCGGCCACCC AGCTCGACCG GCTCGTCGCC
ACCTTCGGGC GGGACAACGT GGCCGTCGAG GTCACCAGCA CCGGCGACCC CTACGACGAC
GAGCGCAACG AGCACCTGGC AGCGCTCGCC CACGCCGCCA GGGTCGACCT CGTCGCGACG
ACCGCCGCGC ACTACGCCCA CCCCCGTGAC GCCGACCTCG CCGCCGCGCT GGCCGCCGTC
CGGGCACGCT CGAGCCTCGA CGACATGGAC GGGTGGCTGC CCGGGGCCCC GTCGGCGCAC
CTGCGCTCGG CCGGCGAGAT GCTCGCACGC CACAGCGCCC ACCCCGAGGC GGTCACGGCC
GCCGCGCGCC TCGGCGCGGA GTGCGCCTTC GACCTGTCCC TCGTCGCCCC GAACCTGCCG
CCCTACCCCG TGCCCGCAGG GCACACCGAG GCCACCTGGC TGCGCGAGCT CGTCCGGCGC
GGGGCCCTCC ACCGGTACGG CCCGCGCGAG TCCGAGCGCG TCCCCGGCGC CTACGCGCAG
ATCGACCGCG AGCTGCGCAT CATCGAGGAC CTCACCTTCC CCGGGTACTT CCTCGTCGTC
TACGACCTCG TCGAGTTCTG CCGGGTCAAC GGGATCCTCG CCCAGGGCCG CGGCTCCGCG
GCGAACTCCG CGGTCTGCTA CGCCCTCGGC ATCACCGCCG TCGACGCCGT CGCGCACGGG
CTGCTCTTCG AGCGCTTCCT CGCGCCCGAG CGCGACGGGC CGCCCGACAT CGACGTCGAC
ATCGAGTCCC AGCGGCGCGA GGAGGTCATC CAGCACGTCT TCGACACCTT CGGGCGCCGG
CACGCGGCCC AGGTCGCCAA CGTCATCTCC TACCGGCCCC GGTCCGCCGT GCGCGACGCG
GCCCGGGCGC TCGGCTACGA CACCGGGCAG CAGGACGCGT GGAGCAAGCA GATCGAGCGC
TGGGGGTCGC TGCGCCCTGC ACCACCGTCG CCCGAGGCCG TCGCGGCAGG GATGCCCGAG
GGCAAGCCCT ACGGCGCGCT CGAGCAGCGC GAGCGCATCC GTGACCCGCT CGTGGAGCCG
ACAGCCCGTG ACGACAGGGC GATGGCCCGC GAGGGCATGT GGGTCAAGGG TGGGCACGCG
CCCCAGCGTG ACACCGAGGA CATCCCGGAC GCCGTCGTCG ACCTCGCCGA GAGGTTCCTG
CGGCTGCCCC GGCACCTCGG CATCCACTCG GGCGGCATGG TCATGTGCGA CCGTCCGGTG
ATCGAGGTGT GCCCCGTCGA GTGGGCCCGC ATGCCCGGGC GCACCGTCCT GCAGTGGGAC
AAGGAGGACT GCGCCGACGC GGGGCTGGTC AAGTTCGACC TGCTGGGCCT GGGCATGCTC
ACCGCGCTGC GCATCGCCTT CGAGCAGGTG AGCACCCACG AGGGCGTCGA GCTCACGCTG
CACGGCCTGC CGCAGGAGGA CCCGGGCGTG TACCGGCTGC TGTGCGCGGC CGACACGATC
GGTGTGTTCC AGGTCGAGTC GCGCGCGCAG ATCTCCACGC TGCCCCGCCT GCAGCCCGAC
TGCTTCTACG ACATCGTCAT CGAGGTCGCC CTCATCCGCC CCGGGCCCAT CCAGGGCAAC
TCCGTCCACC CGTACATCGC CCGCAAGCGC GGGCGGGAGA AGGTCACGTA CCTGCACCCG
CTCCTCGAGA AGTCGCTCGG CAAGACGCTC GGTGTCCCGC TGTTCCAGGA GCAGCTCATG
CAGATGTCGA TCGACCTGGC CGACTTCACC CCGACCGAGG CCGACGCGCT GCGCCGCGCC
ATGGGCTCCA AGCGCTCGAC CGAGAAGATG GAGGCGCTCC ACGAGCGCCT GCTGAGCGGC
ATGGAGAAGA AGGGCATCGA CCGCGTCGCG GGGGAGGAGA TCTTCGACAA GCTCAAGGGC
TTCGCCGACT TCGGGTTCCC CGAGTCGCAC GCCTACTCCT TCGCGTACCT CGTCTACGCG
AGCGCGTGGC TCAAGGTGCA CCACCCCGAG GCGTTCTACG CGGGGCTGCT GGCCGCCCAG
CCGATGGGCT TCTACTCGCC CCAGTCGCTC GTGGCCGACG CCCGCCGCCA CGACGTGCCC
GTGCTGCGCC CCGACCTGCT CGCCTCGCAG CCCCAGGCGG CCGTCGAACC AGCCCCTGGG
AGCGCGCGCG GGCTGGCCGT CCGCCTGGGC CTGGCGTCGG TGCGCACGGT GACCACCGAG
GTCGCCGAGC GTCTCGTCGC AGAACGCACG GAGCACGGAC CGTTCCTCGA CCTGCGGGAC
CTGGCCCGTC GGGTCCGGCT GACCACGGCC CAGCTCGAGG CGCTCGCGAC GGCCGGCGCG
CTCGACTGCC TCGGCGTCGA GCGCCGCGAG GCCCTGTGGG CGGCGGGCGC GCTCGCGCAG
GAGCGACCCG ACACCCTGCC CGGCGTGTCG GTCGGGGTCT CCGCGCCGAT GCTCCCGGGG
ATGAGCGAGG TCGAGACGGC CGTCGCCGAC ACCTGGTCGA CGGGCGTGAC CACCGAGTCG
TACCCCACCC AGTACGCGCG CCCGGGGCTG GTGCGGGCCG GGGCGATCAC CGTCGAGGAG
TGCCGCACGG CGGAGGAGGG TCGGCGTGTC GCCGTGGGCG GGGTGGTCAC GCACCGCCAG
CGCCCAGGCA CCGCGCGGGG TGTGACCTTC CTCTCACTCG AGGACGAGAC GGGGCAGCTG
AACGTCATCT GCTCGCCCGG TCTGTGGCAG CGATTCCGGC GTGTCGCCCG GACTTCTGCG
GCTCTCGTGG TGCGCGGGCG GCTGGAACGC AACGACGGCG CCACGAACCT CGTCGCCGAG
CACCTGTCGG CCCTGTCCTT GCAGGTCACG ACAACTTCAC GAGACTTCCA ATGA
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| Protein sequence | MTDRTRTAAR PEYAELHAHS AFSFLDGANQ PEELAAEAYR LGLTALALTD HDGLYGVVRF
AEAARQLGLP TIFGAELHLP DAVGTLDAPT GVPDPRSEHL LVLARGPQGY RNLSSAIAEG
HLSTGRKGAA DHSLEELGAR ADGQWLVLTG CRKGAVRSAL GSGPTWDPRG AATQLDRLVA
TFGRDNVAVE VTSTGDPYDD ERNEHLAALA HAARVDLVAT TAAHYAHPRD ADLAAALAAV
RARSSLDDMD GWLPGAPSAH LRSAGEMLAR HSAHPEAVTA AARLGAECAF DLSLVAPNLP
PYPVPAGHTE ATWLRELVRR GALHRYGPRE SERVPGAYAQ IDRELRIIED LTFPGYFLVV
YDLVEFCRVN GILAQGRGSA ANSAVCYALG ITAVDAVAHG LLFERFLAPE RDGPPDIDVD
IESQRREEVI QHVFDTFGRR HAAQVANVIS YRPRSAVRDA ARALGYDTGQ QDAWSKQIER
WGSLRPAPPS PEAVAAGMPE GKPYGALEQR ERIRDPLVEP TARDDRAMAR EGMWVKGGHA
PQRDTEDIPD AVVDLAERFL RLPRHLGIHS GGMVMCDRPV IEVCPVEWAR MPGRTVLQWD
KEDCADAGLV KFDLLGLGML TALRIAFEQV STHEGVELTL HGLPQEDPGV YRLLCAADTI
GVFQVESRAQ ISTLPRLQPD CFYDIVIEVA LIRPGPIQGN SVHPYIARKR GREKVTYLHP
LLEKSLGKTL GVPLFQEQLM QMSIDLADFT PTEADALRRA MGSKRSTEKM EALHERLLSG
MEKKGIDRVA GEEIFDKLKG FADFGFPESH AYSFAYLVYA SAWLKVHHPE AFYAGLLAAQ
PMGFYSPQSL VADARRHDVP VLRPDLLASQ PQAAVEPAPG SARGLAVRLG LASVRTVTTE
VAERLVAERT EHGPFLDLRD LARRVRLTTA QLEALATAGA LDCLGVERRE ALWAAGALAQ
ERPDTLPGVS VGVSAPMLPG MSEVETAVAD TWSTGVTTES YPTQYARPGL VRAGAITVEE
CRTAEEGRRV AVGGVVTHRQ RPGTARGVTF LSLEDETGQL NVICSPGLWQ RFRRVARTSA
ALVVRGRLER NDGATNLVAE HLSALSLQVT TTSRDFQ
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